RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PRDM1O75626 825 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 CAP2P40123 477 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 HAND2P61296 217 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 CTDSPL2Q05D32 466 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 GABPAQ06546 454 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 ARSIQ5FYB1 569 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 SPRYD7Q5W111 196 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 EHD4Q9H223 541 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 INCENPQ9NQS7 918 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 PICK1Q9NRD5 415 aa9.38□□□□□ -0.91
CDC42-201ENST00000315554 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 MPHOSPH10O00566 681 aaKnown RBP9.37□□□□□ -0.91
CDC42-201ENST00000315554 CTNND1O60716 968 aaKnown RBP9.37□□□□□ -0.91
CDC42-201ENST00000315554 GH2P01242 217 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 FGAP02671 866 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 PTPRAP18433 802 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 CDK8P49336 464 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 PTH1RQ03431 593 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 PPARAQ07869 468 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 CERKLQ49MI3 558 aaPredicted RBP9.37□□□□□ -0.91
CDC42-201ENST00000315554 SBK1Q52WX2 424 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 NOL9Q5SY16 702 aaKnown RBP9.37□□□□□ -0.91
CDC42-201ENST00000315554 GIMAP6Q6P9H5 292 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 METTL16Q86W50 562 aaKnown RBP9.37□□□□□ -0.91
CDC42-201ENST00000315554 TICAM2Q86XR7 235 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 CLEC10AQ8IUN9 316 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 RUFY2Q8WXA3 655 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 TACC3Q9Y6A5 838 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 ZHX2Q9Y6X8 837 aa9.37□□□□□ -0.91
CDC42-201ENST00000315554 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 IRF6O14896 467 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 SGSM2O43147 1006 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 CDC45O75419 566 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 AKR1B1P15121 316 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 MFAP1P55081 439 aaKnown RBP9.36□□□□□ -0.91
CDC42-201ENST00000315554 NOGQ13253 232 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 DGKZQ13574 1117 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 RAB3GAP1Q15042 981 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 ERO1BQ86YB8 467 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 ZBTB21Q9ULJ3 1066 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 RAD50Q92878 1312 aa9.36□□□□□ -0.91
CDC42-201ENST00000315554 PPIL2Q13356 520 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 SEPT2Q15019 361 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 ALX1Q15699 326 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 UBE2Q2Q8WVN8 375 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 DOCK1Q14185 1865 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 ROBO3Q96MS0 1386 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 CEP350Q5VT06 3117 aa9.35□□□□□ -0.91
CDC42-201ENST00000315554 LAMB1P07942 1786 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 UNCXA6NJT0 531 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 ZBTB48P10074 688 aaPredicted RBP9.34□□□□□ -0.91
CDC42-201ENST00000315554 RASA1P20936 1047 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 GUCY1A2P33402 732 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 MAP2K2P36507 400 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 PPATQ06203 517 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 SPP2Q13103 211 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
CDC42-201ENST00000315554 CCL15Q16663 113 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 FAM47AQ5JRC9 791 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 RRP12Q5JTH9 1297 aaKnown RBP9.34□□□□□ -0.91
CDC42-201ENST00000315554 TBC1D10CQ8IV04 446 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 BRI3BPQ8WY22 251 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 MS4A4AQ96JQ5 239 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 ANO2Q9NQ90 1003 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 TOMM22Q9NS69 142 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 SWAP70Q9UH65 585 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 ATAD5Q96QE3 1844 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDC42-201ENST00000315554 ASNSP08243 561 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 GTF2A2P52657 109 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 ATP2B2Q01814 1243 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 EFCAB3Q8N7B9 438 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 JMYQ8N9B5 988 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 SPRYD3Q8NCJ5 442 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 NKX2-3Q8TAU0 364 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 ACER1Q8TDN7 264 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 PTPN18Q99952 460 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 LSG1Q9H089 658 aaKnown RBP9.34□□□□□ -0.91
CDC42-201ENST00000315554 AFG3L2Q9Y4W6 797 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 TAF6LQ9Y6J9 622 aa9.34□□□□□ -0.91
CDC42-201ENST00000315554 THSD7BQ9C0I4 1608 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 MANSC4A6NHS7 340 aaPredicted RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 ZNF213O14771 459 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 RANBP6O60518 1105 aaKnown RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 TRPA1O75762 1119 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 RGS20O76081 388 aa9.33□□□□□ -0.92
CDC42-201ENST00000315554 SLC3A2P08195 630 aaKnown RBP9.33□□□□□ -0.92
CDC42-201ENST00000315554 HMGB1P09429 215 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms