RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TSPY3P0CV98 308 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 TSPY8P0CW00 308 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 CMA1P23946 247 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 EN1Q05925 392 aaPredicted RBP21.19■□□□□ 0.98
CCDC43-201ENST00000315286 ANKS1AQ92625 1134 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 MXD3Q9BW11 206 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 KAT14Q9H8E8 782 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 RASA1P20936 1047 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 SLC15A2Q16348 729 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 SUGT1Q9Y2Z0 365 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 CNTNAP5Q8WYK1 1306 aa21.19■□□□□ 0.98
CCDC43-201ENST00000315286 DDX60LQ5H9U9 1706 aaKnown RBP21.18■□□□□ 0.98
CCDC43-201ENST00000315286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.18■□□□□ 0.98
CCDC43-201ENST00000315286 XBP1P17861 261 aa21.18■□□□□ 0.98
CCDC43-201ENST00000315286 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.18■□□□□ 0.98
CCDC43-201ENST00000315286 TCP11L1Q9NUJ3 509 aa21.18■□□□□ 0.98
CCDC43-201ENST00000315286 H0YIN7 160 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 ADCY5O95622 1261 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 CDK8P49336 464 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 HS1BP3Q53T59 392 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 CAMKK2Q96RR4 588 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 PHF20Q9BVI0 1012 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 CBX8Q9HC52 389 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 AP5Z1O43299 807 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 C16orf86Q6ZW13 317 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 LUZP1Q86V48 1076 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 PNMA1Q8ND90 353 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 SDF4Q9BRK5 362 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 DNAJC25Q9H1X3 360 aa21.17■□□□□ 0.98
CCDC43-201ENST00000315286 TTF2Q9UNY4 1162 aaKnown RBP21.17■□□□□ 0.98
CCDC43-201ENST00000315286 FOCADQ5VW36 1801 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 G3V3G9 751 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 PFKFB1P16118 471 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 CCDC178Q5BJE1 867 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 RILPL1Q5EBL4 403 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 DCAF8Q5TAQ9 597 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 ZNF287Q9HBT7 754 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 SLX4Q8IY92 1834 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 ZNF202O95125 648 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 KIF5BP33176 963 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 STYK1Q6J9G0 422 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 SHC4Q6S5L8 630 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 ERCC4Q92889 916 aaPredicted RBP21.16■□□□□ 0.98
CCDC43-201ENST00000315286 CLIC6Q96NY7 704 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 EYA3Q99504 573 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 CABP5Q9NP86 173 aa21.16■□□□□ 0.98
CCDC43-201ENST00000315286 CHRNA5P30532 468 aa21.15■□□□□ 0.98
CCDC43-201ENST00000315286 PLCB2Q00722 1185 aa21.15■□□□□ 0.98
CCDC43-201ENST00000315286 ZNF165P49910 485 aa21.14■□□□□ 0.98
CCDC43-201ENST00000315286 ZSCAN30Q86W11 494 aa21.14■□□□□ 0.98
CCDC43-201ENST00000315286 DBNDD1Q9H9R9 158 aa21.14■□□□□ 0.98
CCDC43-201ENST00000315286 KCNQ5Q9NR82 932 aa21.14■□□□□ 0.98
CCDC43-201ENST00000315286 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.98
CCDC43-201ENST00000315286 SNED1Q8TER0 1413 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 KRT2P35908 639 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 SCNN1DP51172 638 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 STAG2Q8N3U4 1231 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 PIBF1Q8WXW3 757 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 STK32BQ9NY57 414 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-201ENST00000315286 STX8Q9UNK0 236 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
CCDC43-201ENST00000315286 FAM205CA6NFA0 338 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 CUTAO60888 179 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 VEGFAP15692 232 aaPredicted RBP21.13■□□□□ 0.97
CCDC43-201ENST00000315286 PICALMQ13492 652 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 TMEM47Q9BQJ4 181 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 HPSEQ9Y251 543 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 A0A087WWV3 80 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 SCG2P13521 617 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 ATP2B1P20020 1258 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 GRM4Q14833 912 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 NPY5RQ15761 445 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 STX1AQ16623 288 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 EARS2Q5JPH6 523 aaKnown RBP21.13■□□□□ 0.97
CCDC43-201ENST00000315286 RESP18Q5W5W9 173 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 PODNQ7Z5L7 613 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 NEDD1Q8NHV4 660 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 CCDC39Q9UFE4 941 aa21.13■□□□□ 0.97
CCDC43-201ENST00000315286 CAVIN2O95810 425 aa21.12■□□□□ 0.97
CCDC43-201ENST00000315286 PFKFB3Q16875 520 aaPredicted RBP21.12■□□□□ 0.97
CCDC43-201ENST00000315286 C11orf57Q6ZUT1 292 aaPredicted RBP21.12■□□□□ 0.97
CCDC43-201ENST00000315286 KRI1Q8N9T8 703 aaKnown RBP21.12■□□□□ 0.97
CCDC43-201ENST00000315286 MAD2L2Q9UI95 211 aa21.12■□□□□ 0.97
CCDC43-201ENST00000315286 FAM237AA0A1B0GTK4 181 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 SYKP43405 635 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 DDX4Q9NQI0 724 aaKnown RBP21.11■□□□□ 0.97
CCDC43-201ENST00000315286 USP40Q9NVE5 1235 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 GOLGB1Q14789 3259 aaKnown RBP21.11■□□□□ 0.97
CCDC43-201ENST00000315286 CLCN1P35523 988 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 KIAA1468Q9P260 1216 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 NOL7Q9UMY1 257 aaKnown RBP21.11■□□□□ 0.97
CCDC43-201ENST00000315286 MTMR7Q9Y216 660 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 ADAMTSL1Q8N6G6 1762 aa21.11■□□□□ 0.97
CCDC43-201ENST00000315286 PTMAP06454 111 aaKnown RBP21.1■□□□□ 0.97
CCDC43-201ENST00000315286 HHIPL2Q6UWX4 724 aa21.1■□□□□ 0.97
CCDC43-201ENST00000315286 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
CCDC43-201ENST00000315286 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.1■□□□□ 0.97
CCDC43-201ENST00000315286 FBXO2Q9UK22 296 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms