RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TBX2Q13207 712 aaPredicted RBP28.92■■■□□ 2.22
HOXB3-201ENST00000311626 MTF1Q14872 753 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 NT5DC1Q5TFE4 455 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 ENOX1Q8TC92 643 aaKnown RBP28.92■■■□□ 2.22
HOXB3-201ENST00000311626 CELF1Q92879 486 aaKnown RBP28.92■■■□□ 2.22
HOXB3-201ENST00000311626 ARHGAP29Q52LW3 1261 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 CATIPQ7Z7H3 387 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 CDC5LQ99459 802 aaKnown RBP28.92■■■□□ 2.22
HOXB3-201ENST00000311626 PHF20Q9BVI0 1012 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 TFCP2L1Q9NZI6 479 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 CEP131Q9UPN4 1083 aa28.92■■■□□ 2.22
HOXB3-201ENST00000311626 MORC2Q9Y6X9 1032 aaPredicted RBP28.92■■■□□ 2.22
HOXB3-201ENST00000311626 CYP2D6P10635 497 aa28.91■■■□□ 2.22
HOXB3-201ENST00000311626 CTR9Q6PD62 1173 aa28.91■■■□□ 2.22
HOXB3-201ENST00000311626 ZNF579Q8NAF0 562 aaKnown RBP28.91■■■□□ 2.22
HOXB3-201ENST00000311626 FAM84BQ96KN1 310 aaPredicted RBP28.91■■■□□ 2.22
HOXB3-201ENST00000311626 WDR24Q96S15 920 aa28.91■■■□□ 2.22
HOXB3-201ENST00000311626 CARD6Q9BX69 1037 aa28.91■■■□□ 2.22
HOXB3-201ENST00000311626 CICQ96RK0 1608 aaPredicted RBP28.91■■■□□ 2.22
HOXB3-201ENST00000311626 SPECC1LQ69YQ0 1117 aa28.9■■■□□ 2.22
HOXB3-201ENST00000311626 KARSQ15046 597 aaKnown RBP28.9■■■□□ 2.22
HOXB3-201ENST00000311626 PAGE5Q96GU1 130 aa28.9■■■□□ 2.22
HOXB3-201ENST00000311626 GNL3LQ9NVN8 582 aaKnown RBP28.9■■■□□ 2.22
HOXB3-201ENST00000311626 AATFQ9NY61 560 aaKnown RBP eCLIP28.9■■■□□ 2.22
HOXB3-201ENST00000311626 MINPP1Q9UNW1 487 aa28.9■■■□□ 2.22
HOXB3-201ENST00000311626 RTL9Q8NET4 1388 aa28.9■■■□□ 2.22
HOXB3-201ENST00000311626 ANAPC4Q9UJX5 808 aa28.9■■■□□ 2.22
HOXB3-201ENST00000311626 BCL9LQ86UU0 1499 aa28.89■■■□□ 2.22
HOXB3-201ENST00000311626 PLCD1P51178 756 aa28.89■■■□□ 2.22
HOXB3-201ENST00000311626 BLZF1Q9H2G9 400 aa28.89■■■□□ 2.22
HOXB3-201ENST00000311626 MYH6P13533 1939 aa28.89■■■□□ 2.22
HOXB3-201ENST00000311626 ZNF804BA4D1E1 1349 aa28.89■■■□□ 2.22
HOXB3-201ENST00000311626 A0A0U1RQJ8 604 aa28.89■■■□□ 2.21
HOXB3-201ENST00000311626 ARHGAP6O43182 974 aa28.89■■■□□ 2.21
HOXB3-201ENST00000311626 GNG11P61952 73 aa28.89■■■□□ 2.21
HOXB3-201ENST00000311626 TROAPQ12815 778 aa28.89■■■□□ 2.21
HOXB3-201ENST00000311626 ATRIPQ8WXE1 791 aa28.89■■■□□ 2.21
HOXB3-201ENST00000311626 GTF2E1P29083 439 aaPredicted RBP28.88■■■□□ 2.21
HOXB3-201ENST00000311626 CAVIN4Q5BKX8 364 aa28.88■■■□□ 2.21
HOXB3-201ENST00000311626 SLC51AQ86UW1 340 aa28.88■■■□□ 2.21
HOXB3-201ENST00000311626 SRBD1Q8N5C6 995 aaKnown RBP28.88■■■□□ 2.21
HOXB3-201ENST00000311626 XBP1P17861 261 aa28.88■■■□□ 2.21
HOXB3-201ENST00000311626 DHX8Q14562 1220 aaKnown RBP28.88■■■□□ 2.21
HOXB3-201ENST00000311626 UTP14CQ5TAP6 766 aaKnown RBP28.88■■■□□ 2.21
HOXB3-201ENST00000311626 IRX2Q9BZI1 471 aaPredicted RBP28.88■■■□□ 2.21
HOXB3-201ENST00000311626 PRPF3O43395 683 aaKnown RBP28.87■■■□□ 2.21
HOXB3-201ENST00000311626 IQCA1Q86XH1 822 aa28.87■■■□□ 2.21
HOXB3-201ENST00000311626 NUTM2AQ8IVF1 878 aaPredicted RBP28.87■■■□□ 2.21
HOXB3-201ENST00000311626 ELOA2Q8IYF1 753 aaPredicted RBP28.87■■■□□ 2.21
HOXB3-201ENST00000311626 GTPBP4Q9BZE4 634 aaKnown RBP28.87■■■□□ 2.21
HOXB3-201ENST00000311626 DACH1Q9UI36 760 aa28.87■■■□□ 2.21
HOXB3-201ENST00000311626 PARP3Q9Y6F1 533 aa28.87■■■□□ 2.21
HOXB3-201ENST00000311626 PHLPP2Q6ZVD8 1323 aa28.87■■■□□ 2.21
HOXB3-201ENST00000311626 CLCN6P51797 869 aa28.87■■■□□ 2.21
HOXB3-201ENST00000311626 NPY5RQ15761 445 aa28.87■■■□□ 2.21
HOXB3-201ENST00000311626 CCP110O43303 1012 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 PTGDRQ13258 359 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 NR1I3Q14994 352 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 MNS1Q8NEH6 495 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 SOWAHDA6NJG2 315 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 ZSCAN12O43309 604 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 DPYDQ12882 1025 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 PIK3AP1Q6ZUJ8 805 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 CREBRFQ8IUR6 639 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 SPATA20Q8TB22 786 aa28.86■■■□□ 2.21
HOXB3-201ENST00000311626 NUTM2BA6NNL0 878 aaPredicted RBP28.85■■■□□ 2.21
HOXB3-201ENST00000311626 NUTM2EB1AL46 878 aaPredicted RBP28.85■■■□□ 2.21
HOXB3-201ENST00000311626 CDC25AP30304 524 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 MECOMQ03112 1051 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 PHLPP1O60346 1717 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 SLFN14P0C7P3 912 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 TTC38Q5R3I4 469 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 KANK3Q6NY19 840 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 MTA3Q9BTC8 594 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 MTMR7Q9Y216 660 aa28.85■■■□□ 2.21
HOXB3-201ENST00000311626 H2AFXP16104 143 aaPredicted RBP28.84■■■□□ 2.21
HOXB3-201ENST00000311626 PRDX5P30044 214 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 KRT222Q8N1A0 295 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 UBXN4Q92575 508 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 MYO1BO43795 1136 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 MCM7P33993 719 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 UBE4AQ14139 1066 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 TMTC3Q6ZXV5 915 aa28.84■■■□□ 2.21
HOXB3-201ENST00000311626 TRIML1Q8N9V2 468 aa28.83■■■□□ 2.21
HOXB3-201ENST00000311626 MRPL44Q9H9J2 332 aaKnown RBP28.83■■■□□ 2.21
HOXB3-201ENST00000311626 BSDC1Q9NW68 430 aaPredicted RBP28.83■■■□□ 2.21
HOXB3-201ENST00000311626 COL14A1Q05707 1796 aaKnown RBP28.83■■■□□ 2.21
HOXB3-201ENST00000311626 SPATA31A1Q5TZJ5 1347 aa28.83■■■□□ 2.21
HOXB3-201ENST00000311626 SYNRGQ9UMZ2 1314 aa28.83■■■□□ 2.21
HOXB3-201ENST00000311626 RCAN1P53805 252 aa28.83■■■□□ 2.21
HOXB3-201ENST00000311626 RBL2Q08999 1139 aa28.83■■■□□ 2.21
HOXB3-201ENST00000311626 APTXQ7Z2E3 356 aaKnown RBP28.83■■■□□ 2.21
HOXB3-201ENST00000311626 LINC00116Q8NCU8 138 aa28.83■■■□□ 2.21
HOXB3-201ENST00000311626 PLCH1Q4KWH8 1693 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 ZNF771Q7L3S4 317 aaPredicted RBP28.82■■■□□ 2.2
HOXB3-201ENST00000311626 TNFRSF25Q93038 417 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 NSUN4Q96CB9 384 aaKnown RBP28.82■■■□□ 2.2
HOXB3-201ENST00000311626 BRIP1Q9BX63 1249 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 CTNND2Q9UQB3 1225 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 CNTNAP5Q8WYK1 1306 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms