RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NOM1Q5C9Z4 860 aaKnown RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 METTL16Q86W50 562 aaKnown RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 TRIM44Q96DX7 344 aaPredicted RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 HOOK2Q96ED9 719 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 CSRNP1Q96S65 589 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 PI4KBQ9UBF8 816 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 NAV1Q8NEY1 1877 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 SIPA1L1O43166 1804 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 PAPPA2Q9BXP8 1791 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 TLDC2A0PJX2 215 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 FOXP2O15409 715 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 CCDC129Q6ZRS4 1044 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 ZNF589Q86UQ0 364 aaPredicted RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 RUFY2Q8WXA3 655 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 IL25Q9H293 177 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 GBA2Q9HCG7 927 aaPredicted RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 CREBZFQ9NS37 354 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 PALD1Q9ULE6 856 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 CCDC171Q6TFL3 1326 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 RAD50Q92878 1312 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 CFAP69A5D8W1 941 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 USP2O75604 605 aaPredicted RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 HSPD1P10809 573 aaKnown RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 COPB2P35606 906 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 PLCD1P51178 756 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 PDAP1Q13442 181 aaKnown RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 ALX1Q15699 326 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 DCAF15Q66K64 600 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 TTC6Q86TZ1 520 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 SAPCD2Q86UD0 394 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 FOXP4Q8IVH2 680 aaPredicted RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 ZSCAN29Q8IWY8 852 aaPredicted RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 IFNL3Q8IZI9 196 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 C2orf69Q8N8R5 385 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 KLRG1Q96E93 195 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 EHD4Q9H223 541 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 ZNF408Q9H9D4 720 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 MCM9Q9NXL9 1143 aa9.73□□□□□ -0.85
CHD6-201ENST00000309279 HERC5Q9UII4 1024 aaKnown RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 FBXO9Q9UK97 447 aaPredicted RBP9.73□□□□□ -0.85
CHD6-201ENST00000309279 USP17L12C9JPN9 530 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 USP17L21D6R901 530 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 SGSM2O43147 1006 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 STK10O94804 968 aaKnown RBP9.72□□□□□ -0.85
CHD6-201ENST00000309279 HLA-DOAP06340 250 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 HSPA6P17066 643 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 GABPAQ06546 454 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 C12orf60Q5U649 245 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 VPS53Q5VIR6 699 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 CTR9Q6PD62 1173 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 MIGA2Q7L4E1 593 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 HHIPL1Q96JK4 782 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 NACAP1Q9BZK3 213 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 EPB41L4AQ9HCS5 686 aaPredicted RBP9.72□□□□□ -0.85
CHD6-201ENST00000309279 SAP30BPQ9UHR5 308 aaKnown RBP9.72□□□□□ -0.85
CHD6-201ENST00000309279 NRBP1Q9UHY1 535 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 ZNF112Q9UJU3 913 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
CHD6-201ENST00000309279 TLL2Q9Y6L7 1015 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 ZMYM6O95789 1325 aa9.72□□□□□ -0.85
CHD6-201ENST00000309279 PHF20L1A8MW92 1017 aa9.71□□□□□ -0.85
CHD6-201ENST00000309279 APPP05067 770 aa9.71□□□□□ -0.85
CHD6-201ENST00000309279 IREB2P48200 963 aaKnown RBP9.71□□□□□ -0.85
CHD6-201ENST00000309279 ARMC9Q7Z3E5 817 aa9.71□□□□□ -0.85
CHD6-201ENST00000309279 EGFL6Q8IUX8 553 aa9.71□□□□□ -0.85
CHD6-201ENST00000309279 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.85
CHD6-201ENST00000309279 ARPP21Q9UBL0 812 aaPredicted RBP9.71□□□□□ -0.85
CHD6-201ENST00000309279 SERPINB13Q9UIV8 391 aa9.71□□□□□ -0.85
CHD6-201ENST00000309279 ANGEL1Q9UNK9 670 aaKnown RBP9.71□□□□□ -0.85
CHD6-201ENST00000309279 CDC45O75419 566 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 FGAP02671 866 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.86
CHD6-201ENST00000309279 SCP2P22307 547 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 TATDN1Q6P1N9 297 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 MOB2Q70IA6 237 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 MSL3Q8N5Y2 521 aaKnown RBP9.71□□□□□ -0.86
CHD6-201ENST00000309279 GIPC2Q8TF65 315 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 ESYT1Q9BSJ8 1104 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 DSCC1Q9BVC3 393 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 ZNF341Q9BYN7 854 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 NAPBQ9H115 298 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 DNAJC18Q9H819 358 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 FZD1Q9UP38 647 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 OTOFQ9HC10 1997 aa9.71□□□□□ -0.86
CHD6-201ENST00000309279 LAMB1P07942 1786 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 ROBO3Q96MS0 1386 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.7□□□□□ -0.86
CHD6-201ENST00000309279 RASSF10A6NK89 507 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 UBE2Q2LH0YL09 131 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 SLURP2P0DP57 97 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 CYP2D6P10635 497 aa9.7□□□□□ -0.86
CHD6-201ENST00000309279 TDO2P48775 406 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms