RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
CKS1B-201ENST00000308987 OSBPL1AQ9BXW6 950 aa6.54□□□□□ -1.36
CKS1B-201ENST00000308987 RNF208Q9H0X6 261 aa6.54□□□□□ -1.36
CKS1B-201ENST00000308987 MAP2P11137 1827 aaKnown RBP6.54□□□□□ -1.36
CKS1B-201ENST00000308987 MEGF6O75095 1541 aa6.54□□□□□ -1.36
CKS1B-201ENST00000308987 A0A1W2PP64 1363 aa6.54□□□□□ -1.36
CKS1B-201ENST00000308987 EDC4Q6P2E9 1401 aaKnown RBP6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L15C9J2P7 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L10C9JJH3 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L13C9JLJ4 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L12C9JPN9 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L11C9JVI0 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L21D6R901 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L18D6R9N7 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L22D6RA61 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L17D6RBQ6 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L19D6RCP7 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L20D6RJB6 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 HSPA5P11021 654 aaKnown RBP6.53□□□□□ -1.36
CKS1B-201ENST00000308987 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
CKS1B-201ENST00000308987 USP17L24Q0WX57 530 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 ZNF648Q5T619 568 aaPredicted RBP6.53□□□□□ -1.36
CKS1B-201ENST00000308987 ANKMY2Q8IV38 441 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 VRTNQ9H8Y1 702 aa6.53□□□□□ -1.36
CKS1B-201ENST00000308987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.53□□□□□ -1.36
CKS1B-201ENST00000308987 WASHC2AQ641Q2 1341 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 GAS2O43903 313 aaKnown RBP6.52□□□□□ -1.37
CKS1B-201ENST00000308987 ZNF124Q15973 351 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 SGO2Q562F6 1265 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 COX20Q5RI15 118 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 DDX54Q8TDD1 881 aaKnown RBP6.52□□□□□ -1.37
CKS1B-201ENST00000308987 IP6K1Q92551 441 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 RUSC1Q9BVN2 902 aa6.52□□□□□ -1.37
CKS1B-201ENST00000308987 FANCIQ9NVI1 1328 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 KIF20BQ96Q89 1820 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 GPR162Q16538 588 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 AMIGO3Q86WK7 504 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 COL23A1Q86Y22 540 aaPredicted RBP6.51□□□□□ -1.37
CKS1B-201ENST00000308987 LTV1Q96GA3 475 aaPredicted RBP6.51□□□□□ -1.37
CKS1B-201ENST00000308987 POP1Q99575 1024 aaKnown RBP6.51□□□□□ -1.37
CKS1B-201ENST00000308987 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 ANKRD36BQ8N2N9 1353 aa6.51□□□□□ -1.37
CKS1B-201ENST00000308987 MAP3K19Q56UN5 1328 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 PKD1L3Q7Z443 1732 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 DBX1A6NMT0 343 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 PTPRAP18433 802 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 HOXC9P31274 260 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 SCNN1AP37088 669 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 NLRP12P59046 1061 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 CPSF6Q16630 551 aaKnown RBP eCLIP6.5□□□□□ -1.37
CKS1B-201ENST00000308987 ETFBKMTQ8IXQ9 262 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 TMC1Q8TDI8 760 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 TESK2Q96S53 571 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 ZMYND15Q9H091 742 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-201ENST00000308987 PPP4R2Q9NY27 417 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 KIF13BQ9NQT8 1826 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 ZBED9Q6R2W3 1325 aa6.5□□□□□ -1.37
CKS1B-201ENST00000308987 MYH14Q7Z406 1995 aaKnown RBP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 BRCA1P38398 1863 aaKnown RBP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 N4BP2Q86UW6 1770 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 MEGF11A6BM72 1044 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 CYP26A1O43174 497 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 KIF4AO95239 1232 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 HNRNPUQ00839 825 aaKnown RBP eCLIP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 TTC39BQ5VTQ0 682 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 SMIM5Q71RC9 77 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 USHBP1Q8N6Y0 703 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 CEP120Q8N960 986 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 WNT8BQ93098 351 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 PRKRIP1Q9H875 184 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 OSGEPQ9NPF4 335 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 PAK6Q9NQU5 681 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-201ENST00000308987 TFCP2L1Q9NZI6 479 aa6.49□□□□□ -1.37
CKS1B-201ENST00000308987 ANKRD26Q9UPS8 1709 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 FAM177BA6PVY3 158 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 H3BRJ5 948 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 PAPLNO95428 1278 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 RFX1P22670 979 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
CKS1B-201ENST00000308987 NFKBIBQ15653 356 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 AGBL5Q8NDL9 886 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 ZCRB1Q8TBF4 217 aaKnown RBP6.48□□□□□ -1.37
CKS1B-201ENST00000308987 FAM200AQ8TCP9 573 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-201ENST00000308987 CARD11Q9BXL7 1154 aa6.48□□□□□ -1.37
CKS1B-201ENST00000308987 ATP10DQ9P241 1426 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms