RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 LINC00301Q8NCQ3 95 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 PNMA1Q8ND90 353 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 SHISA4Q96DD7 197 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 TNMDQ9H2S6 317 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 MYH1P12882 1939 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 DDX60LQ5H9U9 1706 aaKnown RBP25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 MMP1P03956 469 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 CACNB3P54284 484 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 STK38Q15208 465 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 U2AF2P26368 475 aaKnown RBP eCLIP25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 RBM5P52756 815 aaKnown RBP eCLIP25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 NFIAQ12857 509 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 CKAP2LQ8IYA6 745 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 DIS3L2Q8IYB7 885 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 ZNF287Q9HBT7 754 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 VPS54Q9P1Q0 977 aa25.96■■□□□ 1.75
PDLIM2-202ENST00000308354 CCDC192P0DO97 292 aa25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 UVSSAQ2YD98 709 aa25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 CCAR1Q8IX12 1150 aaKnown RBP25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 RGS22Q8NE09 1264 aa25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 CLSTN2Q9H4D0 955 aa25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 POLR3EQ9NVU0 708 aa25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 PCDHA7Q9UN72 937 aa25.95■■□□□ 1.75
PDLIM2-202ENST00000308354 ANO1Q5XXA6 986 aa25.95■■□□□ 1.74
PDLIM2-202ENST00000308354 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.74
PDLIM2-202ENST00000308354 GOLPH3LQ9H4A5 285 aa25.95■■□□□ 1.74
PDLIM2-202ENST00000308354 ATF5Q9Y2D1 282 aaPredicted RBP25.95■■□□□ 1.74
PDLIM2-202ENST00000308354 BAZ2BQ9UIF8 2168 aaKnown RBP25.95■■□□□ 1.74
PDLIM2-202ENST00000308354 YDJCA8MPS7 323 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 PRPF3O43395 683 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 SF3A1Q15459 793 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 CC2D2BQ6DHV5 1058 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 SLURP2P0DP57 97 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 CLCN1P35523 988 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 NR5A1Q13285 461 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 STAG2Q8N3U4 1231 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 OXER1Q8TDS5 423 aa25.94■■□□□ 1.74
PDLIM2-202ENST00000308354 CNTNAP5Q8WYK1 1306 aa25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 SAFBQ15424 915 aaKnown RBP eCLIP25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 RASGRP2Q7LDG7 609 aa25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 ZFPM1Q8IX07 1006 aa25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 TMEM47Q9BQJ4 181 aa25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 TCP11L1Q9NUJ3 509 aa25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 USP25Q9UHP3 1055 aa25.93■■□□□ 1.74
PDLIM2-202ENST00000308354 SPTLC2O15270 562 aa25.92■■□□□ 1.74
PDLIM2-202ENST00000308354 NOSTRINQ8IVI9 506 aa25.92■■□□□ 1.74
PDLIM2-202ENST00000308354 ANKS1AQ92625 1134 aa25.92■■□□□ 1.74
PDLIM2-202ENST00000308354 ZDHHC15Q96MV8 337 aa25.92■■□□□ 1.74
PDLIM2-202ENST00000308354 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
PDLIM2-202ENST00000308354 OSBPL5Q9H0X9 879 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-202ENST00000308354 FOCADQ5VW36 1801 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 VEGFAP15692 232 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 MARCKSP29966 332 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 TYRO3Q06418 890 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 TCP10Q12799 353 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 CCDC93Q567U6 631 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 RBM43Q6ZSC3 357 aaKnown RBP25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 ZSCAN30Q86W11 494 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 NEDD1Q8NHV4 660 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 ZNF277Q9NRM2 450 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 YEATS4O95619 227 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 HS1BP3Q53T59 392 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 CEP95Q96GE4 821 aa25.91■■□□□ 1.74
PDLIM2-202ENST00000308354 FSIP1Q8NA03 581 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 KCNG4Q8TDN1 519 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 MYH6P13533 1939 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 KIF5BP33176 963 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 NT5C2P49902 561 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 GABPAQ06546 454 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 MRVI1Q9Y6F6 885 aa25.9■■□□□ 1.74
PDLIM2-202ENST00000308354 FKBP1AP62942 108 aaKnown RBP25.89■■□□□ 1.74
PDLIM2-202ENST00000308354 CCDC178Q5BJE1 867 aa25.89■■□□□ 1.74
PDLIM2-202ENST00000308354 MAD2L2Q9UI95 211 aa25.89■■□□□ 1.74
PDLIM2-202ENST00000308354 GOLGA8HP0CJ92 632 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 ADALQ6DHV7 355 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 SERPINB13Q9UIV8 391 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 A0A1B0GVL5 298 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 SNW1Q13573 536 aaKnown RBP25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 SLC39A14Q15043 492 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 RTKN2Q8IZC4 609 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 MAP3K14Q99558 947 aa25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 FOXP1Q9H334 677 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-202ENST00000308354 RAD17O75943 681 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 AKR1B1P15121 316 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 XBP1P17861 261 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 TOB1P50616 345 aaPredicted RBP25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 GRM4Q14833 912 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 CCDC73Q6ZRK6 1079 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 CLEC10AQ8IUN9 316 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 LARGE2Q8N3Y3 721 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 PHF20Q9BVI0 1012 aa25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 EIF6P56537 245 aaKnown RBP25.87■■□□□ 1.73
PDLIM2-202ENST00000308354 FAM205CA6NFA0 338 aa25.86■■□□□ 1.73
PDLIM2-202ENST00000308354 ATP2B1P20020 1258 aa25.86■■□□□ 1.73
PDLIM2-202ENST00000308354 PTPAQ15257 358 aa25.86■■□□□ 1.73
PDLIM2-202ENST00000308354 MRIQ9BWK5 157 aa25.86■■□□□ 1.73
PDLIM2-202ENST00000308354 CPVLQ9H3G5 476 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms