RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 PPFIA3O75145 1194 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 PTMSP20962 102 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 NBPF9Q3BBW0 867 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 FAM83AQ86UY5 434 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 GPC2Q8N158 579 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 CSRNP1Q96S65 589 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
KRT28-201ENST00000306658 KIF5BP33176 963 aa20.4■□□□□ 0.86
KRT28-201ENST00000306658 PPP4R3BQ5MIZ7 849 aa20.4■□□□□ 0.86
KRT28-201ENST00000306658 RGS22Q8NE09 1264 aa20.4■□□□□ 0.86
KRT28-201ENST00000306658 STK36Q9NRP7 1315 aa20.4■□□□□ 0.86
KRT28-201ENST00000306658 SBF1O95248 1867 aa20.4■□□□□ 0.86
KRT28-201ENST00000306658 SHTN1A0MZ66 631 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 H7C1D1 291 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 FMNL1O95466 1100 aaPredicted RBP20.39■□□□□ 0.86
KRT28-201ENST00000306658 AKR1B1P15121 316 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.86
KRT28-201ENST00000306658 TNNI2P48788 182 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 RBM26Q5T8P6 1007 aaKnown RBP20.39■□□□□ 0.86
KRT28-201ENST00000306658 CDC37L1Q7L3B6 337 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 WASF1Q92558 559 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 PHKBQ93100 1093 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 CEP95Q96GE4 821 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 TMEM47Q9BQJ4 181 aa20.39■□□□□ 0.86
KRT28-201ENST00000306658 HERC5Q9UII4 1024 aaKnown RBP20.39■□□□□ 0.86
KRT28-201ENST00000306658 TOP1P11387 765 aaKnown RBP20.38■□□□□ 0.85
KRT28-201ENST00000306658 NOVP48745 357 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 CERKLQ49MI3 558 aaPredicted RBP20.38■□□□□ 0.85
KRT28-201ENST00000306658 TATDN1Q6P1N9 297 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 C8orf76Q96K31 380 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 SLC26A6Q9BXS9 759 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 DNAJC18Q9H819 358 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 MTMR4Q9NYA4 1195 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 CNTNAP1P78357 1384 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 TNFAIP1Q13829 316 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 MCTP1Q6DN14 999 aa20.38■□□□□ 0.85
KRT28-201ENST00000306658 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
KRT28-201ENST00000306658 SIPA1L1O43166 1804 aa20.37■□□□□ 0.85
KRT28-201ENST00000306658 IGKV6D-41A0A0C4DH26 115 aa20.37■□□□□ 0.85
KRT28-201ENST00000306658 MPHOSPH10O00566 681 aaKnown RBP20.37■□□□□ 0.85
KRT28-201ENST00000306658 AKAP17AQ02040 695 aaKnown RBP20.37■□□□□ 0.85
KRT28-201ENST00000306658 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
KRT28-201ENST00000306658 RNF181Q9P0P0 153 aa20.37■□□□□ 0.85
KRT28-201ENST00000306658 TTLL1O95922 423 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 GNAQP50148 359 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 KIF4BQ2VIQ3 1234 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 TBC1D10BQ4KMP7 808 aaPredicted RBP20.36■□□□□ 0.85
KRT28-201ENST00000306658 SAMD7Q7Z3H4 446 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 NBPF11Q86T75 865 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 ALG1Q9BT22 464 aa20.36■□□□□ 0.85
KRT28-201ENST00000306658 RNF26Q9BY78 433 aaPredicted RBP20.36■□□□□ 0.85
KRT28-201ENST00000306658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.36■□□□□ 0.85
KRT28-201ENST00000306658 FAM196BA6NMK8 535 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 DEXIO95424 95 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 TMTC3Q6ZXV5 915 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 FBXO18Q8NFZ0 1043 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 EGFRP00533 1210 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 FOSBP53539 338 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 TRIM29Q14134 588 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 GRM4Q14833 912 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 CMTR1Q8N1G2 835 aaKnown RBP20.35■□□□□ 0.85
KRT28-201ENST00000306658 TMEM39BQ9GZU3 492 aa20.35■□□□□ 0.85
KRT28-201ENST00000306658 TBC1D12O60347 775 aa20.34■□□□□ 0.85
KRT28-201ENST00000306658 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
KRT28-201ENST00000306658 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
KRT28-201ENST00000306658 TMEM179Q6ZVK1 233 aa20.34■□□□□ 0.85
KRT28-201ENST00000306658 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
KRT28-201ENST00000306658 CLIP2Q9UDT6 1046 aa20.34■□□□□ 0.85
KRT28-201ENST00000306658 PRPF3O43395 683 aaKnown RBP20.33■□□□□ 0.85
KRT28-201ENST00000306658 PLEKHA8P1O95397 391 aa20.33■□□□□ 0.85
KRT28-201ENST00000306658 SLURP2P0DP57 97 aa20.33■□□□□ 0.85
KRT28-201ENST00000306658 FUT2Q10981 343 aa20.33■□□□□ 0.85
KRT28-201ENST00000306658 ABCB5Q2M3G0 1257 aa20.33■□□□□ 0.85
KRT28-201ENST00000306658 CABP5Q9NP86 173 aa20.33■□□□□ 0.85
KRT28-201ENST00000306658 GUCY1B3Q02153 619 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 RASA3Q14644 834 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 GPR162Q16538 588 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 C9orf131Q5VYM1 1079 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 LZTS2Q9BRK4 669 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 RBM27Q9P2N5 1060 aaKnown RBP20.32■□□□□ 0.84
KRT28-201ENST00000306658 HACL1Q9UJ83 578 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 GREB1LQ9C091 1923 aaPredicted RBP20.32■□□□□ 0.84
KRT28-201ENST00000306658 RESTQ13127 1097 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 SRBD1Q8N5C6 995 aaKnown RBP20.32■□□□□ 0.84
KRT28-201ENST00000306658 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
KRT28-201ENST00000306658 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
KRT28-201ENST00000306658 PARP1P09874 1014 aaKnown RBP20.31■□□□□ 0.84
KRT28-201ENST00000306658 XBP1P17861 261 aa20.31■□□□□ 0.84
KRT28-201ENST00000306658 SKOR2Q2VWA4 1001 aaPredicted RBP20.31■□□□□ 0.84
KRT28-201ENST00000306658 CHAMP1Q96JM3 812 aa20.31■□□□□ 0.84
KRT28-201ENST00000306658 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
KRT28-201ENST00000306658 NYAP2Q9P242 653 aa20.31■□□□□ 0.84
KRT28-201ENST00000306658 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms