RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MYO1AQ9UBC5 1043 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 HDAC6Q9UBN7 1215 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 PCDHB6Q9Y5E3 794 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 VAV2P52735 878 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 KIFC2Q96AC6 838 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 RMND1Q9NWS8 449 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 NEO1Q92859 1461 aa14.65□□□□□ -0.06
TRIM35-201ENST00000305364 DEXIO95424 95 aa14.65□□□□□ -0.07
TRIM35-201ENST00000305364 CDC25AP30304 524 aa14.65□□□□□ -0.07
TRIM35-201ENST00000305364 KIF6Q6ZMV9 814 aa14.65□□□□□ -0.07
TRIM35-201ENST00000305364 EEF2KMTQ96G04 330 aa14.65□□□□□ -0.07
TRIM35-201ENST00000305364 KRT23Q9C075 422 aa14.65□□□□□ -0.07
TRIM35-201ENST00000305364 STAT6P42226 847 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 MRPS25P82663 173 aaKnown RBP14.64□□□□□ -0.07
TRIM35-201ENST00000305364 KCTD16Q68DU8 428 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 NELFBQ8WX92 580 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 KCNJ18B7U540 433 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 MAP2K7O14733 419 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 KCNA6P17658 529 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 KCNJ12Q14500 433 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 CCDC114Q96M63 670 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 ABCF2Q9UG63 623 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 GPTP24298 496 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 MB21D2Q8IYB1 491 aaPredicted RBP14.64□□□□□ -0.07
TRIM35-201ENST00000305364 RPGRIP1Q96KN7 1286 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 PLIN2Q99541 437 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 CNNM2Q9H8M5 875 aa14.64□□□□□ -0.07
TRIM35-201ENST00000305364 LRRIQ3A6PVS8 624 aaPredicted RBP14.63□□□□□ -0.07
TRIM35-201ENST00000305364 COPB1P53618 953 aaKnown RBP14.63□□□□□ -0.07
TRIM35-201ENST00000305364 MORC3Q14149 939 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 CACNA2D4Q7Z3S7 1137 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
TRIM35-201ENST00000305364 EPSTI1Q96J88 318 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 SLC52A2Q9HAB3 445 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 PSMA7O14818 248 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 MARCH6O60337 910 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 MCM7P33993 719 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 KRT2P35908 639 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 TBC1D8BQ0IIM8 1120 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 NR1I3Q14994 352 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 VPS54Q9P1Q0 977 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 TMEM2Q9UHN6 1383 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 BMP15O95972 392 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 HPDP32754 393 aaPredicted RBP14.63□□□□□ -0.07
TRIM35-201ENST00000305364 NBPF14Q5TI25 921 aa14.63□□□□□ -0.07
TRIM35-201ENST00000305364 NDUFA10O95299 355 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 UBA7P41226 1012 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 FXR1P51114 621 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRIM35-201ENST00000305364 SECISBP2LQ93073 1101 aaKnown RBP14.62□□□□□ -0.07
TRIM35-201ENST00000305364 SCLT1Q96NL6 688 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 JPH2Q9BR39 696 aaPredicted RBP14.62□□□□□ -0.07
TRIM35-201ENST00000305364 SELENOOQ9BVL4 669 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 COL15A1P39059 1388 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 C2orf54Q08AI8 447 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 C8orf74Q6P047 294 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 SYMPKQ92797 1274 aaKnown RBP14.62□□□□□ -0.07
TRIM35-201ENST00000305364 RFX7Q2KHR2 1363 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 A0A0U1RQJ8 604 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 A0A1B0GTH6 734 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 PTPREP23469 700 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 FBXW10Q5XX13 1052 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 CCDC121Q6ZUS5 278 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 CATIPQ7Z7H3 387 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 MSANTD4Q8NCY6 345 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 RNF41Q9H4P4 317 aaPredicted RBP14.62□□□□□ -0.07
TRIM35-201ENST00000305364 LUC7LQ9NQ29 371 aaKnown RBP14.62□□□□□ -0.07
TRIM35-201ENST00000305364 INTS13Q9NVM9 706 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 KRT31Q15323 416 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 ABHD10Q9NUJ1 306 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 HPS5Q9UPZ3 1129 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 SLC4A4Q9Y6R1 1079 aa14.62□□□□□ -0.07
TRIM35-201ENST00000305364 MBD4O95243 580 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 NOP2P46087 812 aaKnown RBP14.61□□□□□ -0.07
TRIM35-201ENST00000305364 USP14P54578 494 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 RASGRP2Q7LDG7 609 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 TMTC2Q8N394 836 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 BANK1Q8NDB2 785 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 COG1Q8WTW3 980 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 TAF4BQ92750 862 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 PLEKHG2Q9H7P9 1386 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 ZNF532Q9HCE3 1301 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 SALL1Q9NSC2 1324 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 SH2B2O14492 632 aaPredicted RBP14.61□□□□□ -0.07
TRIM35-201ENST00000305364 GRIN1Q05586 938 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 HELBQ8NG08 1087 aaPredicted RBP14.61□□□□□ -0.07
TRIM35-201ENST00000305364 FAM89AQ96GI7 184 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 AGXT2Q9BYV1 514 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 TRIM10Q9UDY6 481 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 HPSEQ9Y251 543 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 TMEM131LA2VDJ0 1609 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 USP49Q70CQ1 688 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 MAGEB6Q8N7X4 407 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 MMRN2Q9H8L6 949 aa14.61□□□□□ -0.07
TRIM35-201ENST00000305364 MMP1P03956 469 aa14.6□□□□□ -0.07
TRIM35-201ENST00000305364 RNASE9P60153 205 aaKnown RBP14.6□□□□□ -0.07
TRIM35-201ENST00000305364 CYB5R4Q7L1T6 521 aa14.6□□□□□ -0.07
TRIM35-201ENST00000305364 GSDMAQ96QA5 445 aa14.6□□□□□ -0.07
TRIM35-201ENST00000305364 INCENPQ9NQS7 918 aa14.6□□□□□ -0.07
TRIM35-201ENST00000305364 V9GY48 417 aaPredicted RBP14.6□□□□□ -0.07
TRIM35-201ENST00000305364 ANKRD18BA2A2Z9 1011 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms