RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 STK11IPQ8N1F8 1099 aa34.04■■■■□ 3.04
COPS6-201ENST00000303904 ARHGEF10LQ9HCE6 1279 aa34.04■■■■□ 3.04
COPS6-201ENST00000303904 TLR2O60603 784 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 FGAP02671 866 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 AKR1B1P15121 316 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 BMP2KLQ5H9B9 411 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 GPAT2Q6NUI2 795 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 ZNF296Q8WUU4 475 aaPredicted RBP34.03■■■■□ 3.04
COPS6-201ENST00000303904 KIAA1683Q9H0B3 1180 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 KANSL2Q9H9L4 492 aa34.03■■■■□ 3.04
COPS6-201ENST00000303904 PTPRFP10586 1907 aa34.02■■■■□ 3.04
COPS6-201ENST00000303904 FOXP2O15409 715 aa34.02■■■■□ 3.04
COPS6-201ENST00000303904 ICA1Q05084 483 aa34.02■■■■□ 3.04
COPS6-201ENST00000303904 ANAPC4Q9UJX5 808 aa34.02■■■■□ 3.04
COPS6-201ENST00000303904 SMIM22K7EJ46 135 aa34.01■■■■□ 3.03
COPS6-201ENST00000303904 CHMLP26374 656 aa34.01■■■■□ 3.03
COPS6-201ENST00000303904 SMCR8Q8TEV9 937 aaPredicted RBP34.01■■■■□ 3.03
COPS6-201ENST00000303904 DSCC1Q9BVC3 393 aa34.01■■■■□ 3.03
COPS6-201ENST00000303904 RASA1P20936 1047 aa34■■■■□ 3.03
COPS6-201ENST00000303904 OSBPP22059 807 aa34■■■■□ 3.03
COPS6-201ENST00000303904 GUCY1A2P33402 732 aa33.99■■■■□ 3.03
COPS6-201ENST00000303904 COL13A1Q5TAT6 717 aaPredicted RBP33.99■■■■□ 3.03
COPS6-201ENST00000303904 CTNNA3Q9UI47 895 aa33.99■■■■□ 3.03
COPS6-201ENST00000303904 SP3Q02447 781 aa33.98■■■■□ 3.03
COPS6-201ENST00000303904 ARHGEF6Q15052 776 aa33.98■■■■□ 3.03
COPS6-201ENST00000303904 ERO1AQ96HE7 468 aa33.98■■■■□ 3.03
COPS6-201ENST00000303904 R3HDMLQ9H3Y0 253 aa33.98■■■■□ 3.03
COPS6-201ENST00000303904 TSPY3P0CV98 308 aa33.97■■■■□ 3.03
COPS6-201ENST00000303904 TSPY8P0CW00 308 aa33.97■■■■□ 3.03
COPS6-201ENST00000303904 PCP11498 1178 aaKnown RBP33.97■■■■□ 3.03
COPS6-201ENST00000303904 PPP4R3BQ5MIZ7 849 aa33.97■■■■□ 3.03
COPS6-201ENST00000303904 TREML2Q5T2D2 321 aa33.97■■■■□ 3.03
COPS6-201ENST00000303904 C12orf42Q96LP6 360 aa33.97■■■■□ 3.03
COPS6-201ENST00000303904 LOC285556D6RIA3 1793 aa33.97■■■■□ 3.03
COPS6-201ENST00000303904 PRDM1O75626 825 aa33.96■■■■□ 3.03
COPS6-201ENST00000303904 IRX3P78415 501 aaPredicted RBP33.96■■■■□ 3.03
COPS6-201ENST00000303904 ZYXQ15942 572 aaKnown RBP33.96■■■■□ 3.03
COPS6-201ENST00000303904 CASC1Q6TDU7 716 aa33.96■■■■□ 3.03
COPS6-201ENST00000303904 CASP8AP2Q9UKL3 1982 aa33.96■■■■□ 3.03
COPS6-201ENST00000303904 ZNF213O14771 459 aa33.96■■■■□ 3.03
COPS6-201ENST00000303904 ACER1Q8TDN7 264 aa33.96■■■■□ 3.03
COPS6-201ENST00000303904 RNF41Q9H4P4 317 aaPredicted RBP33.96■■■■□ 3.03
COPS6-201ENST00000303904 CYP2C8P10632 490 aa33.95■■■■□ 3.02
COPS6-201ENST00000303904 HOXA7P31268 230 aaPredicted RBP33.95■■■■□ 3.02
COPS6-201ENST00000303904 ATP2B2Q01814 1243 aa33.95■■■■□ 3.02
COPS6-201ENST00000303904 KIF22Q14807 665 aa33.95■■■■□ 3.02
COPS6-201ENST00000303904 EMILIN3Q9NT22 766 aa33.95■■■■□ 3.02
COPS6-201ENST00000303904 CTDSPL2Q05D32 466 aa33.94■■■■□ 3.02
COPS6-201ENST00000303904 IMMTQ16891 758 aaKnown RBP33.94■■■■□ 3.02
COPS6-201ENST00000303904 LPAR1Q92633 364 aa33.94■■■■□ 3.02
COPS6-201ENST00000303904 TOMM22Q9NS69 142 aa33.94■■■■□ 3.02
COPS6-201ENST00000303904 TMX2Q9Y320 296 aa33.94■■■■□ 3.02
COPS6-201ENST00000303904 NT5C2P49902 561 aa33.93■■■■□ 3.02
COPS6-201ENST00000303904 TSPY2A6NKD2 308 aa33.92■■■■□ 3.02
COPS6-201ENST00000303904 GCLCP48506 637 aaPredicted RBP33.92■■■■□ 3.02
COPS6-201ENST00000303904 KIAA1211Q6ZU35 1233 aa33.92■■■■□ 3.02
COPS6-201ENST00000303904 CTU1Q7Z7A3 348 aaKnown RBP33.92■■■■□ 3.02
COPS6-201ENST00000303904 SGSM2O43147 1006 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 ORC4O43929 436 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 EEF2P13639 858 aaKnown RBP33.91■■■■□ 3.02
COPS6-201ENST00000303904 TFAP4Q01664 338 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 DGKZQ13574 1117 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 C17orf99Q6UX52 265 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 MFSD6Q6ZSS7 791 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 SKAP1Q86WV1 359 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 TNS4Q8IZW8 715 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 NEDD1Q8NHV4 660 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 ASCC2Q9H1I8 757 aaPredicted RBP33.91■■■■□ 3.02
COPS6-201ENST00000303904 GOPCQ9HD26 462 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 CPA4Q9UI42 421 aa33.91■■■■□ 3.02
COPS6-201ENST00000303904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.91■■■■□ 3.02
COPS6-201ENST00000303904 USP17L15C9J2P7 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L13C9JLJ4 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L11C9JVI0 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L18D6R9N7 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L22D6RA61 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L17D6RBQ6 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L19D6RCP7 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L20D6RJB6 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 HAND2P61296 217 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 USP17L24Q0WX57 530 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 GTF3C2Q8WUA4 911 aaPredicted RBP33.9■■■■□ 3.02
COPS6-201ENST00000303904 NYAP2Q9P242 653 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 PLIN4Q96Q06 1357 aa33.9■■■■□ 3.02
COPS6-201ENST00000303904 A0A1W2PRG0 241 aa33.89■■■■□ 3.02
COPS6-201ENST00000303904 RANBP6O60518 1105 aaKnown RBP33.89■■■■□ 3.02
COPS6-201ENST00000303904 VCAM1P19320 739 aa33.89■■■■□ 3.02
COPS6-201ENST00000303904 PKN2Q16513 984 aaKnown RBP33.89■■■■□ 3.02
COPS6-201ENST00000303904 AKNAD1Q5T1N1 836 aa33.89■■■■□ 3.02
COPS6-201ENST00000303904 FGRP09769 529 aa33.88■■■■□ 3.01
COPS6-201ENST00000303904 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.88■■■■□ 3.01
COPS6-201ENST00000303904 VCPKMTQ9H867 229 aa33.88■■■■□ 3.01
COPS6-201ENST00000303904 SYNPO2Q9UMS6 1093 aa33.88■■■■□ 3.01
COPS6-201ENST00000303904 ADGRA2Q96PE1 1338 aa33.88■■■■□ 3.01
COPS6-201ENST00000303904 TTLL1O95922 423 aa33.87■■■■□ 3.01
COPS6-201ENST00000303904 CLEC10AQ8IUN9 316 aa33.87■■■■□ 3.01
COPS6-201ENST00000303904 STAG1Q8WVM7 1258 aa33.87■■■■□ 3.01
COPS6-201ENST00000303904 FAM47AQ5JRC9 791 aa33.87■■■■□ 3.01
COPS6-201ENST00000303904 RRP12Q5JTH9 1297 aaKnown RBP33.87■■■■□ 3.01
COPS6-201ENST00000303904 CEP95Q96GE4 821 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms