RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SPP2Q13103 211 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 STOX1Q6ZVD7 989 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 NCOA7Q8NI08 942 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 WDR18Q9BV38 432 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 PLIN4Q96Q06 1357 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 CLEC10AQ8IUN9 316 aa28.9■■■□□ 2.22
HOXC9-201ENST00000303450 GREB1LQ9C091 1923 aaPredicted RBP28.9■■■□□ 2.22
HOXC9-201ENST00000303450 CXCL11O14625 94 aa28.89■■■□□ 2.22
HOXC9-201ENST00000303450 AOC2O75106 756 aa28.89■■■□□ 2.22
HOXC9-201ENST00000303450 GTF2A2P52657 109 aa28.89■■■□□ 2.22
HOXC9-201ENST00000303450 SNAPC2Q13487 334 aa28.89■■■□□ 2.22
HOXC9-201ENST00000303450 RASEFQ8IZ41 740 aa28.89■■■□□ 2.22
HOXC9-201ENST00000303450 KCNH4Q9UQ05 1017 aa28.89■■■□□ 2.22
HOXC9-201ENST00000303450 ATP2B2Q01814 1243 aa28.89■■■□□ 2.21
HOXC9-201ENST00000303450 TSGA10IPQ3SY00 556 aa28.89■■■□□ 2.21
HOXC9-201ENST00000303450 CEP95Q96GE4 821 aa28.89■■■□□ 2.21
HOXC9-201ENST00000303450 ARHGEF10LQ9HCE6 1279 aa28.89■■■□□ 2.21
HOXC9-201ENST00000303450 IGKV6D-41A0A0C4DH26 115 aa28.88■■■□□ 2.21
HOXC9-201ENST00000303450 KRT32Q14532 448 aa28.88■■■□□ 2.21
HOXC9-201ENST00000303450 NKX2-3Q8TAU0 364 aa28.88■■■□□ 2.21
HOXC9-201ENST00000303450 KCNB2Q92953 911 aa28.88■■■□□ 2.21
HOXC9-201ENST00000303450 FEZ1Q99689 392 aa28.88■■■□□ 2.21
HOXC9-201ENST00000303450 ZSWIM5Q9P217 1185 aa28.88■■■□□ 2.21
HOXC9-201ENST00000303450 MANSC4A6NHS7 340 aaPredicted RBP28.87■■■□□ 2.21
HOXC9-201ENST00000303450 USP17L10C9JJH3 530 aa28.87■■■□□ 2.21
HOXC9-201ENST00000303450 EEF2P13639 858 aaKnown RBP28.87■■■□□ 2.21
HOXC9-201ENST00000303450 KIF23Q02241 960 aaPredicted RBP28.87■■■□□ 2.21
HOXC9-201ENST00000303450 PPP4R3BQ5MIZ7 849 aa28.87■■■□□ 2.21
HOXC9-201ENST00000303450 IQCA1Q86XH1 822 aa28.87■■■□□ 2.21
HOXC9-201ENST00000303450 ACER1Q8TDN7 264 aa28.87■■■□□ 2.21
HOXC9-201ENST00000303450 MTMR4Q9NYA4 1195 aa28.87■■■□□ 2.21
HOXC9-201ENST00000303450 NMT2O60551 498 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 MAP2K2P36507 400 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 BACE1P56817 501 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 MTMR2Q13614 643 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 ZIC5Q96T25 663 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 IL17RBQ9NRM6 502 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 TCP11L1Q9NUJ3 509 aa28.86■■■□□ 2.21
HOXC9-201ENST00000303450 TTLL1O95922 423 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 CETPP11597 493 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 SIAH1Q8IUQ4 282 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 DNAJC5GQ8N7S2 189 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 MS4A4AQ96JQ5 239 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 SH2D4AQ9H788 454 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 NYAP2Q9P242 653 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 STX8Q9UNK0 236 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 SNX14Q9Y5W7 946 aa28.85■■■□□ 2.21
HOXC9-201ENST00000303450 CCL15-CCL14A0A0B4J2E2 113 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 A0A0G2JLL6 359 aaPredicted RBP28.84■■■□□ 2.21
HOXC9-201ENST00000303450 C19orf81C9J6K1 198 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 SREBF2Q12772 1141 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 CCL15Q16663 113 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 PRRT2Q7Z6L0 340 aaPredicted RBP28.84■■■□□ 2.21
HOXC9-201ENST00000303450 ZKSCAN3Q9BRR0 538 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 CLIP2Q9UDT6 1046 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 A0A1W2PRG0 241 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 HMGCS2P54868 508 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 INHBEP58166 350 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 ZYXQ15942 572 aaKnown RBP28.84■■■□□ 2.21
HOXC9-201ENST00000303450 NEK1Q96PY6 1258 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 UBAC1Q9BSL1 405 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 KIAA1683Q9H0B3 1180 aa28.84■■■□□ 2.21
HOXC9-201ENST00000303450 PTPRFP10586 1907 aa28.83■■■□□ 2.21
HOXC9-201ENST00000303450 USP14P54578 494 aa28.83■■■□□ 2.21
HOXC9-201ENST00000303450 ADCK5Q3MIX3 580 aa28.83■■■□□ 2.21
HOXC9-201ENST00000303450 CCDC178Q5BJE1 867 aa28.83■■■□□ 2.21
HOXC9-201ENST00000303450 CYB5R4Q7L1T6 521 aa28.83■■■□□ 2.21
HOXC9-201ENST00000303450 MB21D2Q8IYB1 491 aaPredicted RBP28.83■■■□□ 2.21
HOXC9-201ENST00000303450 REM2Q8IYK8 340 aaPredicted RBP28.83■■■□□ 2.21
HOXC9-201ENST00000303450 TMX2Q9Y320 296 aa28.83■■■□□ 2.21
HOXC9-201ENST00000303450 USP17L2Q6R6M4 530 aa28.82■■■□□ 2.2
HOXC9-201ENST00000303450 GADL1Q6ZQY3 521 aa28.82■■■□□ 2.2
HOXC9-201ENST00000303450 FASTKD5Q7L8L6 764 aaKnown RBP28.82■■■□□ 2.2
HOXC9-201ENST00000303450 ZSCAN10Q96SZ4 725 aaPredicted RBP28.82■■■□□ 2.2
HOXC9-201ENST00000303450 TMOD4Q9NZQ9 345 aa28.82■■■□□ 2.2
HOXC9-201ENST00000303450 MYH4Q9Y623 1939 aa28.81■■■□□ 2.2
HOXC9-201ENST00000303450 MCM5P33992 734 aa28.81■■■□□ 2.2
HOXC9-201ENST00000303450 SH3D19Q5HYK7 790 aa28.81■■■□□ 2.2
HOXC9-201ENST00000303450 BRI3BPQ8WY22 251 aa28.81■■■□□ 2.2
HOXC9-201ENST00000303450 TESPA1A2RU30 521 aaPredicted RBP28.8■■■□□ 2.2
HOXC9-201ENST00000303450 CHST3Q7LGC8 479 aa28.8■■■□□ 2.2
HOXC9-201ENST00000303450 MKL1Q969V6 931 aa28.8■■■□□ 2.2
HOXC9-201ENST00000303450 JAKMIP1Q96N16 626 aaKnown RBP28.8■■■□□ 2.2
HOXC9-201ENST00000303450 TTC14Q96N46 770 aa28.8■■■□□ 2.2
HOXC9-201ENST00000303450 UPF2Q9HAU5 1272 aaKnown RBP28.8■■■□□ 2.2
HOXC9-201ENST00000303450 DGKZQ13574 1117 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 SART3Q15020 963 aaKnown RBP28.79■■■□□ 2.2
HOXC9-201ENST00000303450 BACH2Q9BYV9 841 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 TNKSO95271 1327 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 CEP350Q5VT06 3117 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 ERICH2A1L162 156 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 RAD21O60216 631 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 HMGB1P09429 215 aaKnown RBP28.79■■■□□ 2.2
HOXC9-201ENST00000303450 PSMA5P28066 241 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 TM4SF4P48230 202 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 NOVP48745 357 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 DGKHQ86XP1 1220 aa28.79■■■□□ 2.2
HOXC9-201ENST00000303450 LRRC47Q8N1G4 583 aaKnown RBP28.79■■■□□ 2.2
HOXC9-201ENST00000303450 PROCA1Q8NCQ7 364 aaPredicted RBP28.79■■■□□ 2.2
HOXC9-201ENST00000303450 GOPCQ9HD26 462 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms