RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SERPINA10Q9UK55 444 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 CNTNAP5Q8WYK1 1306 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 F8W031 263 aaPredicted RBP12.25□□□□□ -0.45
CLP1-201ENST00000302731 SPTLC2O15270 562 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
CLP1-201ENST00000302731 GRM4Q14833 912 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 CDC42EP5Q6NZY7 148 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 LZTS2Q9BRK4 669 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 FUCA2Q9BTY2 467 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 FTOQ9C0B1 505 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLP1-201ENST00000302731 OSBPL5Q9H0X9 879 aaPredicted RBP12.25□□□□□ -0.45
CLP1-201ENST00000302731 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 EHD4Q9H223 541 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 DACT1Q9NYF0 836 aa12.25□□□□□ -0.45
CLP1-201ENST00000302731 MYH6P13533 1939 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 SCN9AQ15858 1988 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 PSME4Q14997 1843 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 CTAGE5O15320 804 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 C21orf2O43822 256 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 PPP6R2O75170 966 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 PLEKHA8P1O95397 391 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 KCNA3P22001 575 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 ME1P48163 572 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 TGFB2P61812 414 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 AOC3Q16853 763 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 SLC4A8Q2Y0W8 1093 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 RILPL1Q5EBL4 403 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 CCDC73Q6ZRK6 1079 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
CLP1-201ENST00000302731 SRBD1Q8N5C6 995 aaKnown RBP12.24□□□□□ -0.45
CLP1-201ENST00000302731 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 ANP32BQ92688 251 aaKnown RBP12.24□□□□□ -0.45
CLP1-201ENST00000302731 MXD3Q9BW11 206 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
CLP1-201ENST00000302731 PCDHA7Q9UN72 937 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 CLIC4Q9Y696 253 aa12.24□□□□□ -0.45
CLP1-201ENST00000302731 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
CLP1-201ENST00000302731 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 PPIP5K2O43314 1243 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 NR1I2O75469 434 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 HLA-DOAP06340 250 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 SCNN1DP51172 638 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 FAM160A1Q05DH4 1040 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 SF3A1Q15459 793 aaKnown RBP12.23□□□□□ -0.45
CLP1-201ENST00000302731 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
CLP1-201ENST00000302731 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
CLP1-201ENST00000302731 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 PHF20Q9BVI0 1012 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 PANK2Q9BZ23 570 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 DHX36Q9H2U1 1008 aaKnown RBP12.23□□□□□ -0.45
CLP1-201ENST00000302731 DDX4Q9NQI0 724 aaKnown RBP12.23□□□□□ -0.45
CLP1-201ENST00000302731 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 SERPINB13Q9UIV8 391 aa12.23□□□□□ -0.45
CLP1-201ENST00000302731 V9GY48 417 aaPredicted RBP12.23□□□□□ -0.45
CLP1-201ENST00000302731 BTBD18B2RXH4 712 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
CLP1-201ENST00000302731 SCG2P13521 617 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 DPEP1P16444 411 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 PICALMQ13492 652 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 PTPAQ15257 358 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
CLP1-201ENST00000302731 KIAA0825Q8IV33 1275 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 ENGASEQ8NFI3 743 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 MRPS27Q92552 414 aaKnown RBP12.22□□□□□ -0.45
CLP1-201ENST00000302731 TNMDQ9H2S6 317 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 BRMS1Q9HCU9 246 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 SH3GLB2Q9NR46 395 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
CLP1-201ENST00000302731 STX8Q9UNK0 236 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 IGKV6D-41A0A0C4DH26 115 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
CLP1-201ENST00000302731 KRT2P35908 639 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 CCDC173Q0VFZ6 552 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
CLP1-201ENST00000302731 MAD2L2Q9UI95 211 aa12.22□□□□□ -0.45
CLP1-201ENST00000302731 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
CLP1-201ENST00000302731 YDJCA8MPS7 323 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 KINO60870 393 aaKnown RBP12.21□□□□□ -0.46
CLP1-201ENST00000302731 CMA1P23946 247 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 AXDND1Q5T1B0 1012 aaPredicted RBP12.21□□□□□ -0.46
CLP1-201ENST00000302731 FSIP1Q8NA03 581 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 CEP95Q96GE4 821 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 CCDC17Q96LX7 622 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 PPP1R9BQ96SB3 815 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 SPZ1Q9BXG8 430 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 MTFR1LQ9H019 292 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms