RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 PTPRAP18433 802 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 GJA5P36382 358 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 NEK4P51957 841 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 EVCP57679 992 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 FSTL1Q12841 308 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 TRDNQ13061 729 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 TMEM179Q6ZVK1 233 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 ACER1Q8TDN7 264 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 MKL1Q969V6 931 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 MTA3Q9BTC8 594 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 ZNF408Q9H9D4 720 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 GBA2Q9HCG7 927 aaPredicted RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 BRPF3Q9ULD4 1205 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 TNKSO95271 1327 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 PHIPQ8WWQ0 1821 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 ASNSP08243 561 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 EEF2P13639 858 aaKnown RBP11.18□□□□□ -0.62
RFX3-201ENST00000302303 ECE1P42892 770 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 FKBP1BP68106 108 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 RABEP1Q15276 862 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 KIAA1755Q5JYT7 1200 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 Q6ZUG5 572 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
RFX3-201ENST00000302303 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 NYAP2Q9P242 653 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 TRPM7Q96QT4 1865 aa11.18□□□□□ -0.62
RFX3-201ENST00000302303 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
RFX3-201ENST00000302303 NF2P35240 595 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 LIFRP42702 1097 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 IREB2P48200 963 aaKnown RBP11.17□□□□□ -0.62
RFX3-201ENST00000302303 AK2P54819 239 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 ANKRD13AQ8IZ07 590 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 TMEM47Q9BQJ4 181 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 KANSL2Q9H9L4 492 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 GINM1Q9NU53 330 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 PDRG1Q9NUG6 133 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 MYH8P13535 1937 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 ATAD5Q96QE3 1844 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 DOCK1Q14185 1865 aa11.17□□□□□ -0.62
RFX3-201ENST00000302303 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 IFIT3O14879 490 aaKnown RBP11.16□□□□□ -0.62
RFX3-201ENST00000302303 DGKZQ13574 1117 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 RAB3GAP1Q15042 981 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 TMEM67Q5HYA8 995 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 RASGRP2Q7LDG7 609 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 IQCA1Q86XH1 822 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 TPCN1Q9ULQ1 816 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
RFX3-201ENST00000302303 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 LARGE1O95461 756 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 TTLL1O95922 423 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 ICA1Q05084 483 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 APOBRQ0VD83 1088 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 ST3GAL1Q11201 340 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 TROAPQ12815 778 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 MOGSQ13724 837 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 BRF1Q92994 677 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 ELP3Q9H9T3 547 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 CABP5Q9NP86 173 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
RFX3-201ENST00000302303 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 ZHX2Q9Y6X8 837 aa11.15□□□□□ -0.62
RFX3-201ENST00000302303 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
RFX3-201ENST00000302303 ERO1BQ86YB8 467 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 UBAC1Q9BSL1 405 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 STX8Q9UNK0 236 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 FAM155AB1AL88 458 aaPredicted RBP11.14□□□□□ -0.63
RFX3-201ENST00000302303 IRF6O14896 467 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
RFX3-201ENST00000302303 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
RFX3-201ENST00000302303 HUNKP57058 714 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 PPATQ06203 517 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 SPP2Q13103 211 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 WTAPQ15007 396 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 ME3Q16798 604 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 SLC35G1Q2M3R5 365 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
RFX3-201ENST00000302303 APOA5Q6Q788 366 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
RFX3-201ENST00000302303 ZNF280CQ8ND82 737 aa11.14□□□□□ -0.63
RFX3-201ENST00000302303 OPTNQ96CV9 577 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms