RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 RASA1P20936 1047 aa21.74■■□□□ 1.07
SPSB3-201ENST00000301717 SP3Q02447 781 aa21.74■■□□□ 1.07
SPSB3-201ENST00000301717 CTDSPL2Q05D32 466 aa21.74■■□□□ 1.07
SPSB3-201ENST00000301717 NOM1Q5C9Z4 860 aaKnown RBP21.74■■□□□ 1.07
SPSB3-201ENST00000301717 SIAH1Q8IUQ4 282 aa21.74■■□□□ 1.07
SPSB3-201ENST00000301717 PROCA1Q8NCQ7 364 aaPredicted RBP21.74■■□□□ 1.07
SPSB3-201ENST00000301717 FEZ1Q99689 392 aa21.74■■□□□ 1.07
SPSB3-201ENST00000301717 ARHGAP39Q9C0H5 1083 aa21.74■■□□□ 1.07
SPSB3-201ENST00000301717 HSPD1P10809 573 aaKnown RBP21.73■■□□□ 1.07
SPSB3-201ENST00000301717 PPARAQ07869 468 aa21.73■■□□□ 1.07
SPSB3-201ENST00000301717 C17orf99Q6UX52 265 aa21.73■■□□□ 1.07
SPSB3-201ENST00000301717 TMEM179Q6ZVK1 233 aa21.73■■□□□ 1.07
SPSB3-201ENST00000301717 PARK7Q99497 189 aaKnown RBP21.73■■□□□ 1.07
SPSB3-201ENST00000301717 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.73■■□□□ 1.07
SPSB3-201ENST00000301717 TMOD4Q9NZQ9 345 aa21.73■■□□□ 1.07
SPSB3-201ENST00000301717 LOC285556D6RIA3 1793 aa21.73■■□□□ 1.07
SPSB3-201ENST00000301717 PEX10O60683 326 aa21.72■■□□□ 1.07
SPSB3-201ENST00000301717 CTU1Q7Z7A3 348 aaKnown RBP21.72■■□□□ 1.07
SPSB3-201ENST00000301717 MKNK2Q9HBH9 465 aa21.72■■□□□ 1.07
SPSB3-201ENST00000301717 FGAP02671 866 aa21.72■■□□□ 1.07
SPSB3-201ENST00000301717 KIAA1755Q5JYT7 1200 aa21.72■■□□□ 1.07
SPSB3-201ENST00000301717 ASCC2Q9H1I8 757 aaPredicted RBP21.72■■□□□ 1.07
SPSB3-201ENST00000301717 HTTP42858 3142 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 ZSWIM8A7E2V4 1837 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 C19orf81C9J6K1 198 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 CTGFP29279 349 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 HAND2P61296 217 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 ATP2B2Q01814 1243 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 ICA1Q05084 483 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 TICAM2Q86XR7 235 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 CCDC17Q96LX7 622 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 KIAA1683Q9H0B3 1180 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 TRIM17Q9Y577 477 aa21.71■■□□□ 1.07
SPSB3-201ENST00000301717 CAPN15O75808 1086 aa21.7■■□□□ 1.06
SPSB3-201ENST00000301717 FAM47AQ5JRC9 791 aa21.7■■□□□ 1.06
SPSB3-201ENST00000301717 SMCR8Q8TEV9 937 aaPredicted RBP21.7■■□□□ 1.06
SPSB3-201ENST00000301717 SLC45A1Q9Y2W3 748 aa21.7■■□□□ 1.06
SPSB3-201ENST00000301717 BCRP11274 1271 aa21.69■■□□□ 1.06
SPSB3-201ENST00000301717 EEF2P13639 858 aaKnown RBP21.69■■□□□ 1.06
SPSB3-201ENST00000301717 OTOP1Q7RTM1 612 aa21.69■■□□□ 1.06
SPSB3-201ENST00000301717 ERO1AQ96HE7 468 aa21.69■■□□□ 1.06
SPSB3-201ENST00000301717 MYH8P13535 1937 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 HIP1O00291 1037 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 VCAM1P19320 739 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 CHMLP26374 656 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 LACTBP83111 547 aaPredicted RBP21.68■■□□□ 1.06
SPSB3-201ENST00000301717 ALX1Q15699 326 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 ANKRD13CQ8N6S4 541 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 NKX2-3Q8TAU0 364 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 ABHD8Q96I13 439 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 P2RX7Q99572 595 aaKnown RBP21.68■■□□□ 1.06
SPSB3-201ENST00000301717 TAOK2Q9UL54 1235 aa21.68■■□□□ 1.06
SPSB3-201ENST00000301717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.68■■□□□ 1.06
SPSB3-201ENST00000301717 IRX3P78415 501 aaPredicted RBP21.67■■□□□ 1.06
SPSB3-201ENST00000301717 POTEEQ6S8J3 1075 aa21.67■■□□□ 1.06
SPSB3-201ENST00000301717 SPICE1Q8N0Z3 855 aa21.67■■□□□ 1.06
SPSB3-201ENST00000301717 C12orf42Q96LP6 360 aa21.67■■□□□ 1.06
SPSB3-201ENST00000301717 NBPF3Q9H094 633 aa21.67■■□□□ 1.06
SPSB3-201ENST00000301717 OSBPP22059 807 aa21.66■■□□□ 1.06
SPSB3-201ENST00000301717 USP14P54578 494 aa21.66■■□□□ 1.06
SPSB3-201ENST00000301717 ZNF444Q8N0Y2 327 aaPredicted RBP21.66■■□□□ 1.06
SPSB3-201ENST00000301717 EFCC1Q9HA90 598 aa21.66■■□□□ 1.06
SPSB3-201ENST00000301717 PNMA3Q9UL41 463 aa21.66■■□□□ 1.06
SPSB3-201ENST00000301717 HOXA7P31268 230 aaPredicted RBP21.65■■□□□ 1.06
SPSB3-201ENST00000301717 PDE4BQ07343 736 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■□□□□ 10.8
SPSB3-201ENST00000301717 TBC1D10CQ8IV04 446 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 TRIM47Q96LD4 638 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 RPAP3Q9H6T3 665 aaPredicted RBP21.65■■□□□ 1.06
SPSB3-201ENST00000301717 KANSL2Q9H9L4 492 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 ARHGEF10LQ9HCE6 1279 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 TMX2Q9Y320 296 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 CENPFP49454 3210 aa21.65■■□□□ 1.06
SPSB3-201ENST00000301717 IGKV6D-41A0A0C4DH26 115 aa21.64■■□□□ 1.06
SPSB3-201ENST00000301717 SLC3A2P08195 630 aaKnown RBP21.64■■□□□ 1.06
SPSB3-201ENST00000301717 MFAP1P55081 439 aaKnown RBP21.64■■□□□ 1.06
SPSB3-201ENST00000301717 HERVK_113P62684 666 aa21.64■■□□□ 1.06
SPSB3-201ENST00000301717 TFAP4Q01664 338 aa21.64■■□□□ 1.06
SPSB3-201ENST00000301717 CEP95Q96GE4 821 aa21.64■■□□□ 1.06
SPSB3-201ENST00000301717 TXNRD2Q9NNW7 524 aa21.64■■□□□ 1.06
SPSB3-201ENST00000301717 GREB1LQ9C091 1923 aaPredicted RBP21.64■■□□□ 1.05
SPSB3-201ENST00000301717 RAD21O60216 631 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 NMT2O60551 498 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 PSMC4P43686 418 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 RRP12Q5JTH9 1297 aaKnown RBP21.63■■□□□ 1.05
SPSB3-201ENST00000301717 CHMP4CQ96CF2 233 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 TSPY3P0CV98 308 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 TSPY8P0CW00 308 aa21.63■■□□□ 1.05
SPSB3-201ENST00000301717 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms