RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TBC1D9BQ66K14 1250 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 KLHL10Q6JEL2 608 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 SLC51AQ86UW1 340 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 FAM177A1Q8N128 213 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-204ENST00000300862 PHLPP1O60346 1717 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 SARSP49591 514 aaKnown RBP14.74□□□□□ -0.05
HIF3A-204ENST00000300862 STAMQ92783 540 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 CDCA7Q9BWT1 371 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-204ENST00000300862 DNAI1Q9UI46 699 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 ADAMTS3O15072 1205 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 PRDX5P30044 214 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 KRT2P35908 639 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 ADKP55263 362 aaKnown RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 MECOMQ03112 1051 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 TROAPQ12815 778 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 MORC3Q14149 939 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 IQCA1Q86XH1 822 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 PHF20Q9BVI0 1012 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 TMX1Q9H3N1 280 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 SRP68Q9UHB9 627 aaKnown RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 COBLO75128 1261 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 SLU7O95391 586 aaKnown RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 STX17P56962 302 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 SF3B3Q15393 1217 aaKnown RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 DHX37Q8IY37 1157 aaKnown RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 SMYD4Q8IYR2 804 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 ZNF397Q8NF99 534 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-204ENST00000300862 MTA3Q9BTC8 594 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 CEP131Q9UPN4 1083 aa14.73□□□□□ -0.05
HIF3A-204ENST00000300862 FANCGO15287 622 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 XBP1P17861 261 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
HIF3A-204ENST00000300862 NSUN4Q96CB9 384 aaKnown RBP14.72□□□□□ -0.05
HIF3A-204ENST00000300862 PLCH1Q4KWH8 1693 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 ROBO1Q9Y6N7 1651 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 KIF2AO00139 706 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-204ENST00000300862 ZNF18P17022 549 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 NT5DC1Q5TFE4 455 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 FBXO38Q6PIJ6 1188 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 SRBD1Q8N5C6 995 aaKnown RBP14.72□□□□□ -0.05
HIF3A-204ENST00000300862 MLKLQ8NB16 471 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 ERO1AQ96HE7 468 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 BRIP1Q9BX63 1249 aa14.72□□□□□ -0.05
HIF3A-204ENST00000300862 PRPF3O43395 683 aaKnown RBP14.71□□□□□ -0.05
HIF3A-204ENST00000300862 RCAN1P53805 252 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 ERCC6LQ2NKX8 1250 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 PAXIP1Q6ZW49 1069 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-204ENST00000300862 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 THRAP3Q9Y2W1 955 aaKnown RBP14.71□□□□□ -0.05
HIF3A-204ENST00000300862 CACNA1SQ13698 1873 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 MYH6P13533 1939 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.05
HIF3A-204ENST00000300862 VWA3AA6NCI4 1184 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.06
HIF3A-204ENST00000300862 TERF2Q15554 542 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 NPY5RQ15761 445 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.06
HIF3A-204ENST00000300862 CLEC4GQ6UXB4 293 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 TMEM139Q8IV31 216 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 KRT222Q8N1A0 295 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 ENOX1Q8TC92 643 aaKnown RBP14.71□□□□□ -0.06
HIF3A-204ENST00000300862 FAM53CQ9NYF3 392 aa14.71□□□□□ -0.06
HIF3A-204ENST00000300862 KCNJ6P48051 423 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 RPS8P62241 208 aaKnown RBP14.7□□□□□ -0.06
HIF3A-204ENST00000300862 ETF1P62495 437 aaKnown RBP14.7□□□□□ -0.06
HIF3A-204ENST00000300862 TMTC3Q6ZXV5 915 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 FBXO33Q7Z6M2 555 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 REXO1L1PQ8IX06 675 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 ELOA2Q8IYF1 753 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-204ENST00000300862 DCP1AQ9NPI6 582 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-204ENST00000300862 PTGDRQ13258 359 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 TRIM65Q6PJ69 517 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 PAGE5Q96GU1 130 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 L2HGDHQ9H9P8 463 aa14.7□□□□□ -0.06
HIF3A-204ENST00000300862 TEX33O43247 280 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 HIBADHP31937 336 aaKnown RBP14.69□□□□□ -0.06
HIF3A-204ENST00000300862 TAF3Q5VWG9 929 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 PIK3AP1Q6ZUJ8 805 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 SMARCC1Q92922 1105 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-204ENST00000300862 BAG1Q99933 345 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-204ENST00000300862 MTMR7Q9Y216 660 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 DUOX1Q9NRD9 1551 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 PLCD1P51178 756 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 TBX2Q13207 712 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-204ENST00000300862 PPP2R5BQ15173 497 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 CCDC93Q567U6 631 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 TTC38Q5R3I4 469 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 SPECC1LQ69YQ0 1117 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 TOGARAM2Q6ZUX3 1019 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 TC2NQ8N9U0 490 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 CTCFLQ8NI51 663 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-204ENST00000300862 SPATA20Q8TB22 786 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 DESI2Q9BSY9 194 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 BLZF1Q9H2G9 400 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 DACH1Q9UI36 760 aa14.69□□□□□ -0.06
HIF3A-204ENST00000300862 CNTNAP5Q8WYK1 1306 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 MYH13Q9UKX3 1938 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 URI1O94763 535 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms