RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 GLIPR1L2Q4G1C9 344 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 SMCR8Q8TEV9 937 aaPredicted RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 DCAF4Q8WV16 495 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 ALDH8A1Q9H2A2 487 aaPredicted RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 MRC1P22897 1456 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 SH2B2O14492 632 aaPredicted RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 TSGA10IPQ3SY00 556 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 PI16Q6UXB8 463 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 TDRD7Q8NHU6 1098 aaKnown RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 LAD1O00515 517 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 ORC4O43929 436 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 PDIA3P30101 505 aaKnown RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 NAP1L1P55209 391 aaKnown RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 ME3Q16798 604 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 LETM2Q2VYF4 491 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 MCM7P33993 719 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 CDK8P49336 464 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 KIF22Q14807 665 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 DIXDC1Q155Q3 683 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 CAMK4Q16566 473 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 SBK1Q52WX2 424 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 BLIDQ8IZY5 108 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 CLRN2A0PK11 232 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 GCOM1H8Y6P7 765 aaPredicted RBP9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 POLR2MP0CAP2 368 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 IFNAR1P17181 557 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 PRDX5P30044 214 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 HOXA7P31268 230 aaPredicted RBP9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 FAM160A1Q05DH4 1040 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 FMNL3Q8IVF7 1028 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 SYCP3Q8IZU3 236 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 NT5C3AQ9H0P0 336 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 SERPINA10Q9UK55 444 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 KDM3AQ9Y4C1 1321 aa9.4□□□□□ -0.9
SNRPD1-201ENST00000300413 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.91
SNRPD1-201ENST00000300413 CCDC65Q8IXS2 484 aa9.4□□□□□ -0.91
SNRPD1-201ENST00000300413 UBA5Q9GZZ9 404 aa9.4□□□□□ -0.91
SNRPD1-201ENST00000300413 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.91
SNRPD1-201ENST00000300413 RNF181Q9P0P0 153 aa9.4□□□□□ -0.91
SNRPD1-201ENST00000300413 SMCO2A6NFE2 343 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 CCDC172P0C7W6 258 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 BMP3P12645 472 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 COPB2P35606 906 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 GSDMDP57764 484 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 A0A0U1RQG5 324 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 SRGNP10124 158 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 PIK3AP1Q6ZUJ8 805 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 SV2BQ7L1I2 683 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 NSUN4Q96CB9 384 aaKnown RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 DCP1AQ9NPI6 582 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 CHRNA5P30532 468 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 ASIC1P78348 528 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 CCDC40Q4G0X9 1142 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 RSBN1LQ6PCB5 846 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 CNKSR2Q8WXI2 1034 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 FOXP1Q9H334 677 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 PSTPIP2Q9H939 334 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 FAM13AO94988 1023 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 KIFC2Q96AC6 838 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 SH3GLB2Q9NR46 395 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 MYO6Q9UM54 1294 aa9.39□□□□□ -0.91
SNRPD1-201ENST00000300413 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 BRD1O95696 1058 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 ZNF165P49910 485 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 CUL4AQ13619 759 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 ZYXQ15942 572 aaKnown RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 SH3RF3Q8TEJ3 882 aaPredicted RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 DPEP1P16444 411 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 MARCKSP29966 332 aaPredicted RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 MTIF2P46199 727 aaKnown RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 CASP7P55210 303 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 PPP1R18Q6NYC8 613 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 CCDC174Q6PII3 467 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 STK36Q9NRP7 1315 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 ATRNO75882 1429 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 TMEM232C9JQI7 657 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 PRPF3O43395 683 aaKnown RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 FLOT1O75955 427 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 FKBP1AP62942 108 aaKnown RBP9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 KLHL10Q6JEL2 608 aa9.38□□□□□ -0.91
SNRPD1-201ENST00000300413 LRSAM1Q6UWE0 723 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms