RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 PLEKHA8P1O95397 391 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 CXCL9Q07325 125 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 TRIM29Q14134 588 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 RBM26Q5T8P6 1007 aaKnown RBP16.42■□□□□ 0.22
CDH16-201ENST00000299752 RSBN1LQ6PCB5 846 aaPredicted RBP16.42■□□□□ 0.22
CDH16-201ENST00000299752 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 STK36Q9NRP7 1315 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
CDH16-201ENST00000299752 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
CDH16-201ENST00000299752 DDTLA6NHG4 134 aaPredicted RBP16.41■□□□□ 0.22
CDH16-201ENST00000299752 TCP10L2B9ZVM9 353 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 PRELPP51888 382 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 TROAPQ12815 778 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 RCSD1Q6JBY9 416 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 BRAPQ7Z569 592 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 MYSM1Q5VVJ2 828 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 DACT1Q9NYF0 836 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 FAM198AQ9UFP1 575 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
CDH16-201ENST00000299752 GNL2Q13823 731 aaKnown RBP16.41■□□□□ 0.22
CDH16-201ENST00000299752 C16orf86Q6ZW13 317 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 RNF214Q8ND24 703 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 JDP2Q8WYK2 163 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 CLIC4Q9Y696 253 aa16.41■□□□□ 0.22
CDH16-201ENST00000299752 ZNF646O15015 1829 aaPredicted RBP16.4■□□□□ 0.22
CDH16-201ENST00000299752 CAMK4Q16566 473 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 WASF1Q92558 559 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
CDH16-201ENST00000299752 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
CDH16-201ENST00000299752 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
CDH16-201ENST00000299752 NR1I2O75469 434 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 DEXIO95424 95 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 AKR1B1P15121 316 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 ME1P48163 572 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 ATP2B2Q01814 1243 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 ROBO3Q96MS0 1386 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
CDH16-201ENST00000299752 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 KCNJ14Q9UNX9 436 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
CDH16-201ENST00000299752 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 SH3BP5LQ7L8J4 393 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 RGS22Q8NE09 1264 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
CDH16-201ENST00000299752 DDAH1O94760 285 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 EGFRP00533 1210 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 CALM1P0DP23 149 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 CALM2P0DP24 149 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 CALM3P0DP25 149 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 SERPINB13Q9UIV8 391 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 BRCA1P38398 1863 aaKnown RBP16.38■□□□□ 0.21
CDH16-201ENST00000299752 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 STAG2Q8N3U4 1231 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 SPON1Q9HCB6 807 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 RAD21O60216 631 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
CDH16-201ENST00000299752 STK38Q15208 465 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 LINC00301Q8NCQ3 95 aa16.38■□□□□ 0.21
CDH16-201ENST00000299752 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
CDH16-201ENST00000299752 FUT2Q10981 343 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 CTCFLQ8NI51 663 aaPredicted RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 TMEM47Q9BQJ4 181 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 RNF26Q9BY78 433 aaPredicted RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 V9GY48 417 aaPredicted RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 MYH6P13533 1939 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 MMP1P03956 469 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDH16-201ENST00000299752 FKBP1AP62942 108 aaKnown RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 ARHGAP27Q6ZUM4 889 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
CDH16-201ENST00000299752 GMLQ99445 158 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDH16-201ENST00000299752 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 PCDHA7Q9UN72 937 aa16.37■□□□□ 0.21
CDH16-201ENST00000299752 BTBD18B2RXH4 712 aa16.36■□□□□ 0.21
CDH16-201ENST00000299752 GRIPAP1Q4V328 841 aa16.36■□□□□ 0.21
CDH16-201ENST00000299752 HLA-DOAP06340 250 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms