RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 FOXP4Q8IVH2 680 aaPredicted RBP21.58■■□□□ 1.04
SEC61A2-201ENST00000298428 FAM151AQ8WW52 585 aa21.58■■□□□ 1.04
SEC61A2-201ENST00000298428 CSRNP1Q96S65 589 aa21.58■■□□□ 1.04
SEC61A2-201ENST00000298428 CNOT7Q9UIV1 285 aaKnown RBP21.58■■□□□ 1.04
SEC61A2-201ENST00000298428 IFNAR1P17181 557 aa21.57■■□□□ 1.04
SEC61A2-201ENST00000298428 RBM26Q5T8P6 1007 aaKnown RBP21.57■■□□□ 1.04
SEC61A2-201ENST00000298428 PHKBQ93100 1093 aa21.57■■□□□ 1.04
SEC61A2-201ENST00000298428 RBM28Q9NW13 759 aaKnown RBP21.57■■□□□ 1.04
SEC61A2-201ENST00000298428 CNTNAP1P78357 1384 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 FAM196BA6NMK8 535 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 SLURP2P0DP57 97 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 PNMA1Q8ND90 353 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 CEP95Q96GE4 821 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 DDX11L8A8MPP1 907 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 EGFRP00533 1210 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 METTL16Q86W50 562 aaKnown RBP21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 GPC2Q8N158 579 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 CTCFLQ8NI51 663 aaPredicted RBP21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 TMEM47Q9BQJ4 181 aa21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.56■■□□□ 1.04
SEC61A2-201ENST00000298428 FOSBP53539 338 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 SSRP1Q08945 709 aaKnown RBP21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 SAMD7Q7Z3H4 446 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 FAM83AQ86UY5 434 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 CCDC17Q96LX7 622 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 SLC26A6Q9BXS9 759 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 ATP6V1DQ9Y5K8 247 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 STK36Q9NRP7 1315 aa21.55■■□□□ 1.04
SEC61A2-201ENST00000298428 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 RNF181Q9P0P0 153 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 IGKV6D-41A0A0C4DH26 115 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 GOLGA6L22H0YM25 854 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 NOVP48745 357 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 FOXD4L6Q3SYB3 417 aaPredicted RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 CERKLQ49MI3 558 aaPredicted RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 TBC1D10BQ4KMP7 808 aaPredicted RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 TATDN1Q6P1N9 297 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 FOXD4L3Q6VB84 417 aaPredicted RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 TRIM22Q8IYM9 498 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 CMTR1Q8N1G2 835 aaKnown RBP21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 CHAMP1Q96JM3 812 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 MTMR4Q9NYA4 1195 aa21.54■■□□□ 1.04
SEC61A2-201ENST00000298428 H7C1D1 291 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 KIF4BQ2VIQ3 1234 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 MCTP1Q6DN14 999 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 NBPF11Q86T75 865 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 FERMT3Q86UX7 667 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 CCDC82Q8N4S0 544 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 C8orf76Q96K31 380 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 MAP3K14Q99558 947 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 TMEM39BQ9GZU3 492 aa21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 HERC5Q9UII4 1024 aaKnown RBP21.53■■□□□ 1.04
SEC61A2-201ENST00000298428 TOP1P11387 765 aaKnown RBP21.52■■□□□ 1.04
SEC61A2-201ENST00000298428 KIF5BP33176 963 aa21.52■■□□□ 1.04
SEC61A2-201ENST00000298428 TNNI2P48788 182 aa21.52■■□□□ 1.04
SEC61A2-201ENST00000298428 ANP32EQ9BTT0 268 aa21.52■■□□□ 1.04
SEC61A2-201ENST00000298428 PLEKHA8P1O95397 391 aa21.52■■□□□ 1.03
SEC61A2-201ENST00000298428 TMTC3Q6ZXV5 915 aa21.52■■□□□ 1.03
SEC61A2-201ENST00000298428 ALG1Q9BT22 464 aa21.52■■□□□ 1.03
SEC61A2-201ENST00000298428 GPRC5DQ9NZD1 345 aa21.52■■□□□ 1.03
SEC61A2-201ENST00000298428 GREB1LQ9C091 1923 aaPredicted RBP21.52■■□□□ 1.03
SEC61A2-201ENST00000298428 GUCY1B3Q02153 619 aa21.51■■□□□ 1.03
SEC61A2-201ENST00000298428 TNFAIP1Q13829 316 aa21.51■■□□□ 1.03
SEC61A2-201ENST00000298428 WASF1Q92558 559 aa21.51■■□□□ 1.03
SEC61A2-201ENST00000298428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.51■■□□□ 1.03
SEC61A2-201ENST00000298428 TTLL1O95922 423 aa21.5■■□□□ 1.03
SEC61A2-201ENST00000298428 GRM4Q14833 912 aa21.5■■□□□ 1.03
SEC61A2-201ENST00000298428 C9orf131Q5VYM1 1079 aa21.5■■□□□ 1.03
SEC61A2-201ENST00000298428 CLEC10AQ8IUN9 316 aa21.5■■□□□ 1.03
SEC61A2-201ENST00000298428 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
SEC61A2-201ENST00000298428 RNF26Q9BY78 433 aaPredicted RBP21.5■■□□□ 1.03
SEC61A2-201ENST00000298428 DEXIO95424 95 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 FUT2Q10981 343 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 PPP4R3BQ5MIZ7 849 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 FBXO18Q8NFZ0 1043 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 MTMR7Q9Y216 660 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 UBE2Q2LH0YL09 131 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 AKAP17AQ02040 695 aaKnown RBP21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 RASA3Q14644 834 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 OTUD7BQ6GQQ9 843 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 CDAN1Q8IWY9 1227 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 RGS22Q8NE09 1264 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 ZSCAN16Q9H4T2 348 aaPredicted RBP21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 HACL1Q9UJ83 578 aa21.49■■□□□ 1.03
SEC61A2-201ENST00000298428 ASTN2O75129 1339 aaPredicted RBP21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 GDF11O95390 407 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 PTMSP20962 102 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 RESTQ13127 1097 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 GPR162Q16538 588 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 ABCB5Q2M3G0 1257 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 TMEM179Q6ZVK1 233 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 SRBD1Q8N5C6 995 aaKnown RBP21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 PGAP2Q9UHJ9 254 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 MAD2L2Q9UI95 211 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 SCAF8Q9UPN6 1271 aaKnown RBP21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 CNTNAP5Q8WYK1 1306 aa21.48■■□□□ 1.03
SEC61A2-201ENST00000298428 DDNO94850 711 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms