RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 TBX2Q13207 712 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 TSC1Q92574 1164 aa11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GSDMAQ96QA5 445 aa11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CTAGE1Q96RT6 745 aa11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ABCF2Q9UG63 623 aa11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 MINPP1Q9UNW1 487 aa11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ATP1A3P13637 1013 aa11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 TROAPQ12815 778 aa11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 UTP14CQ5TAP6 766 aaKnown RBP11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SH3GLB2Q9NR46 395 aa11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 FANCLQ9NW38 375 aa11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 PCDHB6Q9Y5E3 794 aa11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 BAZ2AQ9UIF9 1905 aaKnown RBP11.42□□□□□ -0.58
TNFRSF11B-201ENST00000297350 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 TPM1P09493 284 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CALML3P27482 149 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 KIF5BP33176 963 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 PKN1Q16512 942 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ADGRA1Q86SQ6 560 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 FAM84BQ96KN1 310 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ZKSCAN3Q9BRR0 538 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SERTAD1Q9UHV2 236 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 KCNQ2O43526 872 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GYG1P46976 350 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 PDE4BQ07343 736 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SDR42E1Q8WUS8 393 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 TNFRSF25Q93038 417 aa11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 NSUN4Q96CB9 384 aaKnown RBP11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 NAA15Q9BXJ9 866 aaKnown RBP11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GTPBP4Q9BZE4 634 aaKnown RBP11.41□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SNAP23O00161 211 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 BMP6P22004 513 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 NR5A1Q13285 461 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 SPATA1Q5VX52 437 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CTR9Q6PD62 1173 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 LINC00116Q8NCU8 138 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CSRNP2Q9H175 543 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ZNF215Q9UL58 517 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 NFE2L3Q9Y4A8 694 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CNTNAP5Q8WYK1 1306 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ROBO3Q96MS0 1386 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 CDK11BP21127 795 aaKnown RBP11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GNAQP50148 359 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ARL6IP4Q66PJ3 421 aaKnown RBP11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 GALNT17Q6IS24 598 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 PANX2Q96RD6 677 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 NARFQ9UHQ1 456 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 AFF2P51816 1311 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 COL4A1P02462 1669 aa11.4□□□□□ -0.58
TNFRSF11B-201ENST00000297350 A0A1B0GTH6 734 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 FAM193AP78312 1265 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 TTC38Q5R3I4 469 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 HOMER1Q86YM7 354 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 CCDC51Q96ER9 411 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 BAG1Q99933 345 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 DNAI1Q9UI46 699 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 SCG2P13521 617 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 HSPA1LP34931 641 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 SPAG1Q07617 926 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 FILIP1LQ4L180 1135 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 IQUBQ8NA54 791 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 DPF2Q92785 391 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 VPS54Q9P1Q0 977 aa11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF11B-201ENST00000297350 ITIH6Q6UXX5 1313 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 BRWD3Q6RI45 1802 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 UBE2Q2LH0YL09 131 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 MYL1P05976 194 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 GSTO1P78417 241 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 ISM2Q6H9L7 571 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
TNFRSF11B-201ENST00000297350 USP17L21D6R901 530 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms