RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GCC1Q96CN9 775 aa30.53■■■□□ 2.48
U2AF1-201ENST00000291552 FEZ1Q99689 392 aa30.53■■■□□ 2.48
U2AF1-201ENST00000291552 LRRCC1Q9C099 1032 aa30.53■■■□□ 2.48
U2AF1-201ENST00000291552 KIAA1683Q9H0B3 1180 aa30.53■■■□□ 2.48
U2AF1-201ENST00000291552 MBD4O95243 580 aa30.52■■■□□ 2.48
U2AF1-201ENST00000291552 SGPL1O95470 568 aa30.52■■■□□ 2.48
U2AF1-201ENST00000291552 Q3C1V9 767 aa30.52■■■□□ 2.48
U2AF1-201ENST00000291552 SLC44A5Q8NCS7 719 aa30.52■■■□□ 2.48
U2AF1-201ENST00000291552 GPRC5AQ8NFJ5 357 aa30.52■■■□□ 2.48
U2AF1-201ENST00000291552 ERVK-9P63128 1117 aa30.51■■■□□ 2.47
U2AF1-201ENST00000291552 ERVK-24P63145 666 aa30.51■■■□□ 2.47
U2AF1-201ENST00000291552 TRIM32Q13049 653 aa30.51■■■□□ 2.47
U2AF1-201ENST00000291552 SEPT2Q15019 361 aa30.51■■■□□ 2.47
U2AF1-201ENST00000291552 HABP4Q5JVS0 413 aaKnown RBP30.51■■■□□ 2.47
U2AF1-201ENST00000291552 PORCNQ9H237 461 aa30.51■■■□□ 2.47
U2AF1-201ENST00000291552 SMIM22K7EJ46 135 aa30.5■■■□□ 2.47
U2AF1-201ENST00000291552 CNMDO75829 334 aa30.5■■■□□ 2.47
U2AF1-201ENST00000291552 FARP2O94887 1054 aaPredicted RBP30.5■■■□□ 2.47
U2AF1-201ENST00000291552 HMGCRP04035 888 aa30.5■■■□□ 2.47
U2AF1-201ENST00000291552 VCAM1P19320 739 aa30.5■■■□□ 2.47
U2AF1-201ENST00000291552 DEFB118Q96PH6 123 aa30.5■■■□□ 2.47
U2AF1-201ENST00000291552 PAGR1Q9BTK6 254 aa30.5■■■□□ 2.47
U2AF1-201ENST00000291552 H0YGN5 161 aa30.49■■■□□ 2.47
U2AF1-201ENST00000291552 TRIB2Q92519 343 aa30.49■■■□□ 2.47
U2AF1-201ENST00000291552 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.49■■■□□ 2.47
U2AF1-201ENST00000291552 CABP5Q9NP86 173 aa30.49■■■□□ 2.47
U2AF1-201ENST00000291552 PARP14Q460N5 1801 aa30.49■■■□□ 2.47
U2AF1-201ENST00000291552 A0A0G2JMZ2 1700 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L15C9J2P7 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L13C9JLJ4 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L11C9JVI0 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L18D6R9N7 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L22D6RA61 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L17D6RBQ6 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L19D6RCP7 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L20D6RJB6 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP14P54578 494 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 USP17L24Q0WX57 530 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 GTF3C2Q8WUA4 911 aaPredicted RBP30.48■■■□□ 2.47
U2AF1-201ENST00000291552 DYNLL2Q96FJ2 89 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 CRISPLD2Q9H0B8 497 aa30.48■■■□□ 2.47
U2AF1-201ENST00000291552 A0A1W2PRG0 241 aa30.47■■■□□ 2.47
U2AF1-201ENST00000291552 UBE3CQ15386 1083 aa30.47■■■□□ 2.47
U2AF1-201ENST00000291552 CATSPERGQ6ZRH7 1159 aa30.47■■■□□ 2.47
U2AF1-201ENST00000291552 USP6NLQ92738 828 aa30.47■■■□□ 2.47
U2AF1-201ENST00000291552 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.47■■■□□ 2.47
U2AF1-201ENST00000291552 CYP2B6P20813 491 aa30.46■■■□□ 2.47
U2AF1-201ENST00000291552 DCTPP1Q9H773 170 aa30.46■■■□□ 2.47
U2AF1-201ENST00000291552 CYP2D7A0A087X1C5 515 aa30.45■■■□□ 2.47
U2AF1-201ENST00000291552 MAPK4P31152 587 aa30.45■■■□□ 2.47
U2AF1-201ENST00000291552 ATP8A2Q9NTI2 1148 aa30.45■■■□□ 2.47
U2AF1-201ENST00000291552 MORN1Q5T089 497 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 GPR142Q7Z601 462 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 CLEC10AQ8IUN9 316 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 SOCS4Q8WXH5 440 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 NUDT12Q9BQG2 462 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 PUS7LQ9H0K6 701 aaKnown RBP30.44■■■□□ 2.46
U2AF1-201ENST00000291552 RPAP3Q9H6T3 665 aaPredicted RBP30.44■■■□□ 2.46
U2AF1-201ENST00000291552 COLQQ9Y215 455 aaPredicted RBP30.44■■■□□ 2.46
U2AF1-201ENST00000291552 RABGAP1Q9Y3P9 1069 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 FRMPD3Q5JV73 1810 aa30.44■■■□□ 2.46
U2AF1-201ENST00000291552 GREB1LQ9C091 1923 aaPredicted RBP30.43■■■□□ 2.46
U2AF1-201ENST00000291552 RANBP2P49792 3224 aaKnown RBP30.43■■■□□ 2.46
U2AF1-201ENST00000291552 SPDYE16A6NNV3 312 aaPredicted RBP30.43■■■□□ 2.46
U2AF1-201ENST00000291552 MPHOSPH10O00566 681 aaKnown RBP30.43■■■□□ 2.46
U2AF1-201ENST00000291552 TFRCP02786 760 aaKnown RBP30.43■■■□□ 2.46
U2AF1-201ENST00000291552 TSHZ3Q63HK5 1081 aa30.43■■■□□ 2.46
U2AF1-201ENST00000291552 LBX2Q6XYB7 198 aa30.43■■■□□ 2.46
U2AF1-201ENST00000291552 DPF3Q92784 378 aa30.43■■■□□ 2.46
U2AF1-201ENST00000291552 ECHDC1Q9NTX5 307 aa30.43■■■□□ 2.46
U2AF1-201ENST00000291552 SWAP70Q9UH65 585 aa30.43■■■□□ 2.46
U2AF1-201ENST00000291552 AKR1B1P15121 316 aa30.42■■■□□ 2.46
U2AF1-201ENST00000291552 KIAA1755Q5JYT7 1200 aa30.42■■■□□ 2.46
U2AF1-201ENST00000291552 MAP3K21Q5TCX8 1036 aa30.42■■■□□ 2.46
U2AF1-201ENST00000291552 BTBD7Q9P203 1132 aa30.42■■■□□ 2.46
U2AF1-201ENST00000291552 XRCC5P13010 732 aaKnown RBP30.41■■■□□ 2.46
U2AF1-201ENST00000291552 C12orf60Q5U649 245 aa30.41■■■□□ 2.46
U2AF1-201ENST00000291552 TMEM179Q6ZVK1 233 aa30.41■■■□□ 2.46
U2AF1-201ENST00000291552 PLEKHH3Q7Z736 793 aa30.41■■■□□ 2.46
U2AF1-201ENST00000291552 SIAH1Q8IUQ4 282 aa30.41■■■□□ 2.46
U2AF1-201ENST00000291552 DIS3LQ8TF46 1054 aaKnown RBP30.41■■■□□ 2.46
U2AF1-201ENST00000291552 HTATIP2Q9BUP3 242 aa30.41■■■□□ 2.46
U2AF1-201ENST00000291552 RPTORQ8N122 1335 aa30.41■■■□□ 2.46
U2AF1-201ENST00000291552 CCL14Q16627 93 aa30.4■■■□□ 2.46
U2AF1-201ENST00000291552 SLC4A4Q9Y6R1 1079 aa30.4■■■□□ 2.46
U2AF1-201ENST00000291552 USP17L12C9JPN9 530 aa30.39■■■□□ 2.46
U2AF1-201ENST00000291552 USP17L21D6R901 530 aa30.39■■■□□ 2.46
U2AF1-201ENST00000291552 HMX1Q9NP08 348 aaPredicted RBP30.39■■■□□ 2.46
U2AF1-201ENST00000291552 PCDHB15Q9Y5E8 787 aa30.39■■■□□ 2.46
U2AF1-201ENST00000291552 COL11A1P12107 1806 aaPredicted RBP30.38■■■□□ 2.45
U2AF1-201ENST00000291552 ZNF236Q9UL36 1845 aa30.38■■■□□ 2.45
U2AF1-201ENST00000291552 PRKAR2AP13861 404 aaKnown RBP30.38■■■□□ 2.45
U2AF1-201ENST00000291552 CDK8P49336 464 aa30.38■■■□□ 2.45
U2AF1-201ENST00000291552 ZSCAN25Q6NSZ9 544 aa30.38■■■□□ 2.45
U2AF1-201ENST00000291552 C16orf86Q6ZW13 317 aa30.38■■■□□ 2.45
U2AF1-201ENST00000291552 ZKSCAN1P17029 563 aaPredicted RBP30.37■■■□□ 2.45
U2AF1-201ENST00000291552 CAPN2P17655 700 aa30.37■■■□□ 2.45
U2AF1-201ENST00000291552 RGS2P41220 211 aa30.37■■■□□ 2.45
U2AF1-201ENST00000291552 MNX1P50219 401 aaPredicted RBP30.37■■■□□ 2.45
U2AF1-201ENST00000291552 CTR9Q6PD62 1173 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms