RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MYH4Q9Y623 1939 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 SUPT20HL1Q3ZLR7 823 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 L1TD1Q5T7N2 865 aaKnown RBP9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 TMEM179Q6ZVK1 233 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 UPF3BQ9BZI7 483 aaKnown RBP9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 DEFB129Q9H1M3 183 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 LOC285556D6RIA3 1793 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 PFKFB2O60825 505 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 TCP10Q12799 353 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 NOC3LQ8WTT2 800 aaKnown RBP9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 ZNF341Q9BYN7 854 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 TSPY2A6NKD2 308 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 ATP2B1P20020 1258 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 WTAPQ15007 396 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 TMEM67Q5HYA8 995 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 LDHDQ86WU2 507 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 TMEM39BQ9GZU3 492 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 GZF1Q9H116 711 aaPredicted RBP9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 TNKSO95271 1327 aa9.85□□□□□ -0.83
PTPDC1-201ENST00000288976 LLPHQ9BRT6 129 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 TRPM7Q96QT4 1865 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 CERKLQ49MI3 558 aaPredicted RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 RBM26Q5T8P6 1007 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 NFXL1Q6ZNB6 911 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 NYAP2Q9P242 653 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 CPLX1O14810 134 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 CTNND1O60716 968 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 VEGFAP15692 232 aaPredicted RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 TFAP4Q01664 338 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 ENAHQ8N8S7 591 aaPredicted RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 MKL1Q969V6 931 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 RBM28Q9NW13 759 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 CCDC69A6NI79 296 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 GTF3C6Q969F1 213 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 TMX3Q96JJ7 454 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 CEP89Q96ST8 783 aa9.84□□□□□ -0.83
PTPDC1-201ENST00000288976 PHF20L1A8MW92 1017 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 EVX2Q03828 476 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 IFIT1BQ5T764 474 aaKnown RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 IL17RBQ9NRM6 502 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 MAP1BP46821 2468 aaKnown RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 TTLL1O95922 423 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 TOP1P11387 765 aaKnown RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 GMCL1P1Q8NEA9 526 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 KANSL2Q9H9L4 492 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 ASTN2O75129 1339 aaPredicted RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 CPA1P15085 419 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 ABCB5Q2M3G0 1257 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 RCSD1Q6JBY9 416 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 BRF1Q92994 677 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 CABP5Q9NP86 173 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 MTMR4Q9NYA4 1195 aa9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 R3HCC1Q9Y3T6 440 aaKnown RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
PTPDC1-201ENST00000288976 CAP2P40123 477 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 FKBP1BP68106 108 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 CDC37L1Q7L3B6 337 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 FAM184AQ8NB25 1140 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 SLC44A5Q8NCS7 719 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 SH2D4AQ9H788 454 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 SLC12A7Q9Y666 1083 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 SMIM22K7EJ46 135 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 AKR1B1P15121 316 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 PDIA3P30101 505 aaKnown RBP9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 NF2P35240 595 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 TMEM132AQ24JP5 1023 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 APOA5Q6Q788 366 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 CATIPQ7Z7H3 387 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 INCENPQ9NQS7 918 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 STK36Q9NRP7 1315 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 CCDC196A0A1B0GTZ2 297 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 PRDM1O75626 825 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 SMARCA1P28370 1054 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 LZTS2Q9BRK4 669 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 KAT14Q9H8E8 782 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 CDKL5O76039 1030 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 ME3Q16798 604 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 FAM47AQ5JRC9 791 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 BRPF3Q9ULD4 1205 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 ZBTB21Q9ULJ3 1066 aa9.82□□□□□ -0.84
PTPDC1-201ENST00000288976 KLF18A0A0U1RQI7 1052 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 GOLGA6L6A8MZA4 724 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 ASNSP08243 561 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 COL9A3Q14050 684 aaPredicted RBP9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 KRT26Q7Z3Y9 468 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 CCDC34Q96HJ3 373 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 ZBTB43O43298 467 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms