RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RIMBP2O15034 1052 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 ZBTB43O43298 467 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 CAVIN2O95810 425 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 RHBDL3P58872 404 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 TMEM67Q5HYA8 995 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 SASS6Q6UVJ0 657 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 SNRNP27Q8WVK2 155 aaKnown RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 EPB41L4AQ9HCS5 686 aaPredicted RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 KCNQ5Q9NR82 932 aa8.69□□□□□ -1.02
TRIM42-201ENST00000286349 ORC3Q9UBD5 711 aaPredicted RBP8.69□□□□□ -1.02
TRIM42-201ENST00000286349 STK36Q9NRP7 1315 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC196A0A1B0GTZ2 297 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 B4E1Z4 1266 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 FDPSP14324 419 aaKnown RBP8.68□□□□□ -1.02
TRIM42-201ENST00000286349 HIBADHP31937 336 aaKnown RBP8.68□□□□□ -1.02
TRIM42-201ENST00000286349 APOA5Q6Q788 366 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 CYB5R4Q7L1T6 521 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 LCORLQ8N3X6 602 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 FBXO18Q8NFZ0 1043 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 BICD2Q8TD16 824 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 IGDCC4Q8TDY8 1250 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 RANBP17Q9H2T7 1088 aaKnown RBP8.68□□□□□ -1.02
TRIM42-201ENST00000286349 ABCF2Q9UG63 623 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 SLC12A7Q9Y666 1083 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 NEDD4P46934 1319 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 COL4A5P29400 1685 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 ANKRD33BA6NCL7 494 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 IFIT3O14879 490 aaKnown RBP8.68□□□□□ -1.02
TRIM42-201ENST00000286349 AOC3Q16853 763 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 ARHGAP27Q6ZUM4 889 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
TRIM42-201ENST00000286349 FUCA2Q9BTY2 467 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 TNMDQ9H2S6 317 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 LY9Q9HBG7 655 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 TFIP11Q9UBB9 837 aaKnown RBP8.68□□□□□ -1.02
TRIM42-201ENST00000286349 SYNPO2Q9UMS6 1093 aa8.68□□□□□ -1.02
TRIM42-201ENST00000286349 MYO5AQ9Y4I1 1855 aaKnown RBP8.67□□□□□ -1.02
TRIM42-201ENST00000286349 MYH15Q9Y2K3 1946 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 ADD1P35611 737 aaKnown RBP8.67□□□□□ -1.02
TRIM42-201ENST00000286349 PPARAQ07869 468 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 CACNA1SQ13698 1873 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 DOK7Q18PE1 504 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 SOGA3Q5TF21 947 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 FAM173BQ6P4H8 233 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
TRIM42-201ENST00000286349 KCNG4Q8TDN1 519 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 ESR2Q92731 530 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 NOL10Q9BSC4 688 aaKnown RBP8.67□□□□□ -1.02
TRIM42-201ENST00000286349 CLSTN2Q9H4D0 955 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 RTEL1Q9NZ71 1219 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC39Q9UFE4 941 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 NOL7Q9UMY1 257 aaKnown RBP8.67□□□□□ -1.02
TRIM42-201ENST00000286349 PPME1Q9Y570 386 aa8.67□□□□□ -1.02
TRIM42-201ENST00000286349 GOLGA8AA7E2F4 631 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 YEATS4O95619 227 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 KIAA2012Q0VF49 1180 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 TRIM29Q14134 588 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 SF3A1Q15459 793 aaKnown RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 GPR162Q16538 588 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 CCDC73Q6ZRK6 1079 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 CACTIN-AS1Q8N1I8 211 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 CXorf56Q9H5V9 222 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 DACT1Q9NYF0 836 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 ZSWIM5Q9P217 1185 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 LTBP3Q9NS15 1303 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 MAST2Q6P0Q8 1798 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 YDJCA8MPS7 323 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 MARCH6O60337 910 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 SLC3A2P08195 630 aaKnown RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 IARSP41252 1262 aaKnown RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 WTAPQ15007 396 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 DNAJC21Q5F1R6 531 aaKnown RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 ANKRD13AQ8IZ07 590 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 FEZ1Q99689 392 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 RIOK1Q9BRS2 568 aaKnown RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 ZC3H12CQ9C0D7 883 aaKnown RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 TAOK3Q9H2K8 898 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
TRIM42-201ENST00000286349 CHD4Q14839 1912 aa8.66□□□□□ -1.02
TRIM42-201ENST00000286349 A0A1W2PQ27 194 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 A0A1W2PQ64 194 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 A0A1W2PQD8 194 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 DTNBO60941 627 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 ABCD1P33897 745 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 CTDSPL2Q05D32 466 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 SSRP1Q08945 709 aaKnown RBP8.65□□□□□ -1.02
TRIM42-201ENST00000286349 LONRF3Q496Y0 759 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 MIGA1Q8NAN2 632 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.02
TRIM42-201ENST00000286349 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 PGBD1Q96JS3 809 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 UBAC1Q9BSL1 405 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
TRIM42-201ENST00000286349 CRNKL1Q9BZJ0 848 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms