RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 INTS4Q96HW7 963 aaKnown RBP22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 STX8Q9UNK0 236 aa22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 HPS5Q9UPZ3 1129 aa22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 PHF20L1A8MW92 1017 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 ADM5C9JUS6 153 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 ZBTB43O43298 467 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 ST3GAL1Q11201 340 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 PPP4R3BQ5MIZ7 849 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 CCDC83Q8IWF9 413 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 ZNF654Q8IZM8 581 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 CABP5Q9NP86 173 aa22.13■■□□□ 1.13
PDLIM3-202ENST00000284770 RCAN1P53805 252 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 SCRN1Q12765 414 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 CATIPQ7Z7H3 387 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 KAT14Q9H8E8 782 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 KANSL2Q9H9L4 492 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 POLR2AP24928 1970 aaKnown RBP22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 GH2P01242 217 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 CAP2P40123 477 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 CCT2P78371 535 aaKnown RBP22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 JAG1P78504 1218 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 SHROOM1Q2M3G4 852 aaPredicted RBP22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 TMEM47Q9BQJ4 181 aa22.12■■□□□ 1.13
PDLIM3-202ENST00000284770 GREB1LQ9C091 1923 aaPredicted RBP22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 TTLL1O95922 423 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 GUCY1A2P33402 732 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 USP48Q86UV5 1035 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 MICU3Q86XE3 530 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 CHMP4CQ96CF2 233 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 MYL10Q9BUA6 226 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 ZNF341Q9BYN7 854 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 CLEC11AQ9Y240 323 aa22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.11■■□□□ 1.13
PDLIM3-202ENST00000284770 POTEIP0CG38 1075 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 POTEJP0CG39 1038 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 TOP1P11387 765 aaKnown RBP22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 METAP2P50579 478 aaKnown RBP eCLIP22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 TROAPQ12815 778 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 SEPT2Q15019 361 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CDC37L1Q7L3B6 337 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 RAB11FIP4Q86YS3 637 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 DDAH1O94760 285 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CALM1P0DP23 149 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CALM2P0DP24 149 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CALM3P0DP25 149 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 RXRAP19793 462 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 DLK2Q6UY11 383 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CLEC10AQ8IUN9 316 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 PNMA1Q8ND90 353 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 NCOA5Q9HCD5 579 aaKnown RBP22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 NMRK2Q9NPI5 230 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CHMP5Q9NZZ3 219 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CLIP2Q9UDT6 1046 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 ZNF112Q9UJU3 913 aa22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 CIZ1Q9ULV3 898 aaPredicted RBP22.1■■□□□ 1.13
PDLIM3-202ENST00000284770 NID2Q14112 1375 aa22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 SSC5DA1L4H1 1573 aa22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 DHX16O60231 1041 aaKnown RBP22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 CTNND1O60716 968 aaKnown RBP22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 RAB3GAP1Q15042 981 aa22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 CWC22Q9HCG8 908 aaKnown RBP22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 NYAP2Q9P242 653 aa22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 ZBTB21Q9ULJ3 1066 aa22.09■■□□□ 1.13
PDLIM3-202ENST00000284770 GOLGA8AA7E2F4 631 aa22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 ICA1Q05084 483 aa22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 FANCBQ8NB91 859 aa22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 ZNF526Q8TF50 670 aaPredicted RBP22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 NUP133Q8WUM0 1156 aa22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 MKL1Q969V6 931 aa22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 GLIS2Q9BZE0 524 aaPredicted RBP22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 GINM1Q9NU53 330 aa22.08■■□□□ 1.13
PDLIM3-202ENST00000284770 ASNSP08243 561 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 EEF2P13639 858 aaKnown RBP22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 PPP2R5BQ15173 497 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 SIAH1Q8IUQ4 282 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 CCDC144CPQ8IYA2 1237 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 CDCA5Q96FF9 252 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 LLPHQ9BRT6 129 aaKnown RBP22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 CDC27P30260 824 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 LDHDQ86WU2 507 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 KLRG1Q96E93 195 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 MAP3K14Q99558 947 aa22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 FAM217BQ9NTX9 383 aaPredicted RBP22.07■■□□□ 1.12
PDLIM3-202ENST00000284770 CCDC196A0A1B0GTZ2 297 aa22.06■■□□□ 1.12
PDLIM3-202ENST00000284770 ADD1P35611 737 aaKnown RBP22.06■■□□□ 1.12
PDLIM3-202ENST00000284770 ATP2B2Q01814 1243 aa22.06■■□□□ 1.12
PDLIM3-202ENST00000284770 RTN1Q16799 776 aa22.06■■□□□ 1.12
PDLIM3-202ENST00000284770 MAP1SQ66K74 1059 aaPredicted RBP22.06■■□□□ 1.12
PDLIM3-202ENST00000284770 WRNIP1Q96S55 665 aa22.06■■□□□ 1.12
PDLIM3-202ENST00000284770 CPLX1O14810 134 aa22.05■■□□□ 1.12
PDLIM3-202ENST00000284770 USP2O75604 605 aaPredicted RBP22.05■■□□□ 1.12
PDLIM3-202ENST00000284770 INPP5BP32019 993 aa22.05■■□□□ 1.12
PDLIM3-202ENST00000284770 FZD1Q9UP38 647 aa22.05■■□□□ 1.12
PDLIM3-202ENST00000284770 SMC3Q9UQE7 1217 aa22.05■■□□□ 1.12
PDLIM3-202ENST00000284770 PPP1R12BO60237 982 aaPredicted RBP22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 CTDNEP1O95476 244 aa22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 NF2P35240 595 aa22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 LRRC47Q8N1G4 583 aaKnown RBP22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 NSUN7Q8NE18 718 aaKnown RBP22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 CTCFLQ8NI51 663 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms