RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NRDCO43847 1150 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 TPM4P67936 248 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 DYNLL2Q96FJ2 89 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 YEATS4O95619 227 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 USP5P45974 858 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 TERF2Q15554 542 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 E4F1Q66K89 784 aaPredicted RBP21■□□□□ 0.95
PDLIM3-201ENST00000284767 FANCBQ8NB91 859 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 LINC00301Q8NCQ3 95 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
PDLIM3-201ENST00000284767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21■□□□□ 0.95
PDLIM3-201ENST00000284767 IL1R1P14778 569 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 NDUFA8P51970 172 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 FAM193AP78312 1265 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 SSRP1Q08945 709 aaKnown RBP20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 MFSD14BQ5SR56 506 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 MYSM1Q5VVJ2 828 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 TGFBRAP1Q8WUH2 860 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 POLR3EQ9NVU0 708 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 V9GYY5 206 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 A0A1B0GVL5 298 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 hCG_1642624A0A1W2PR95 340 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 FGRP09769 529 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 PPP1R13BQ96KQ4 1090 aa20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 MKRN1Q9UHC7 482 aaKnown RBP20.99■□□□□ 0.95
PDLIM3-201ENST00000284767 IFNAR1P17181 557 aa20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 SFPQP23246 707 aaKnown RBP eCLIP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 STK38Q15208 465 aa20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 SF3A1Q15459 793 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 DPCR1Q3MIW9 517 aa20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 XPO4Q9C0E2 1151 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 FMNL1O95466 1100 aaPredicted RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 IFIT1BQ5T764 474 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 MAPKAPK5Q8IW41 473 aa20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 RTFDC1Q9BY42 306 aaPredicted RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 KCNJ14Q9UNX9 436 aa20.98■□□□□ 0.95
PDLIM3-201ENST00000284767 SMC2O95347 1197 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 ARMCX5Q6P1M9 558 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 SP8Q8IXZ3 490 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 FBXW7Q969H0 707 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 ARPP21Q9UBL0 812 aaPredicted RBP20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 ATP6V0A2Q9Y487 856 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 KIAA1551Q9HCM1 1747 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 NLRP12P59046 1061 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 GTF2IP78347 998 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 POTEAQ6S8J7 498 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 TMC6Q7Z403 805 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 BRAPQ7Z569 592 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 SLC44A5Q8NCS7 719 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 MXD3Q9BW11 206 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 IFNKQ9P0W0 207 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 PARP3Q9Y6F1 533 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 MROH7-TTC4A0A0A0MT08 1334 aa20.97■□□□□ 0.95
PDLIM3-201ENST00000284767 BTDP43251 543 aa20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 IQCA1Q86XH1 822 aa20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 TMTC2Q8N394 836 aa20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 CCP110O43303 1012 aa20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 SLC3A2P08195 630 aaKnown RBP20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 CCDC93Q567U6 631 aa20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 CREBRFQ8IUR6 639 aa20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 CRACR2BQ8N4Y2 399 aaPredicted RBP20.96■□□□□ 0.95
PDLIM3-201ENST00000284767 NID2Q14112 1375 aa20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 F8W031 263 aaPredicted RBP20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 SPTLC2O15270 562 aa20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 PLEKHA8P1O95397 391 aa20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 H2AFXP16104 143 aaPredicted RBP20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 PLCD1P51178 756 aa20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 DOK7Q18PE1 504 aa20.95■□□□□ 0.95
PDLIM3-201ENST00000284767 LTBP1Q14766 1721 aa20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 SBK1Q52WX2 424 aa20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 C12orf60Q5U649 245 aa20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 ZNF622Q969S3 477 aaKnown RBP eCLIP20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 MTA3Q9BTC8 594 aa20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 ZNF219Q9P2Y4 722 aaPredicted RBP20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 LAMB1P07942 1786 aa20.95■□□□□ 0.94
PDLIM3-201ENST00000284767 TSPY2A6NKD2 308 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 ZBTB22O15209 634 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 EN1Q05925 392 aaPredicted RBP20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 GNL2Q13823 731 aaKnown RBP20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 RGS22Q8NE09 1264 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 COL11A2P13942 1736 aaPredicted RBP20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 IKBKBO14920 756 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 ORC4O43929 436 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 BAG3O95817 575 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 NPR1P16066 1061 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 GSTO1P78417 241 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 TROAPQ12815 778 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 SHISA4Q96DD7 197 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 LRRC37AA6NMS7 1700 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 BAZ2BQ9UIF8 2168 aaKnown RBP20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 STK36Q9NRP7 1315 aa20.94■□□□□ 0.94
PDLIM3-201ENST00000284767 BTBD18B2RXH4 712 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 TRIM29Q14134 588 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 BMS1Q14692 1282 aaKnown RBP20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 NCAPHQ15003 741 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms