RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PSPC1Q8WXF1 523 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 LPIN2Q92539 896 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 DCPSQ96C86 337 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 FAM81BQ96LP2 452 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TTC1Q99614 292 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ZSWIM4Q9H7M6 989 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TBX22Q9Y458 520 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ATP10DQ9P241 1426 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF233A6NK53 670 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PPIP5K2O43314 1243 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TNNC2P02585 160 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PCP11498 1178 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CAPN2P17655 700 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 SDSP20132 328 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MAN1A1P33908 653 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TYRO3Q06418 890 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PAK2Q13177 524 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MFSD14BQ5SR56 506 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 HDXQ7Z353 690 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TMTC1Q8IUR5 882 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MLKLQ8NB16 471 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PROCA1Q8NCQ7 364 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CDHR1Q96JP9 859 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TTC25Q96NG3 672 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 DACT1Q9NYF0 836 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 DONSONQ9NYP3 566 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 WDR64B1ANS9 1081 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PDE8AO60658 829 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 XRCC5P13010 732 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ARHGAP25P42331 645 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MCM6Q14566 821 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 HERC4Q5GLZ8 1057 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TMED8Q6PL24 325 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PALM2Q8IXS6 379 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CSGALNACT2Q8N6G5 542 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 BBOF1Q8ND07 529 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TRIM11Q96F44 468 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MRPL11Q9Y3B7 192 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PHLPP2Q6ZVD8 1323 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CC2D2BQ6DHV5 1058 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 POTEDQ86YR6 584 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 SNX29Q8TEQ0 813 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 IP6K1Q92551 441 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 RAB17Q9H0T7 212 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PPANQ9NQ55 473 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CAPN9O14815 690 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ARHGAP6O43182 974 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CUTAO60888 179 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ATP6V1E1P36543 226 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 UAP1Q16222 522 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 AKNAD1Q5T1N1 836 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 HHATQ5VTY9 493 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 NFATC2IPQ8NCF5 419 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 KCNH3Q9ULD8 1083 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 GCP02774 474 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MYCLP12524 364 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ASPHQ12797 758 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PAK1Q13153 545 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ANKRD20A3Q5VUR7 823 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 C1orf228Q6PIY5 440 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 MIER3Q7Z3K6 550 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 SLFN12Q8IYM2 578 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 IGSF22Q8N9C0 903 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 APPBP2Q92624 585 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 SECISBP2LQ93073 1101 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ITGA6P23229 1130 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 DMP1Q13316 513 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TTC38Q5R3I4 469 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 PHLDB3Q6NSJ2 640 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 RSRC2Q7L4I2 434 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 IFT81Q8WYA0 676 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 SNX21Q969T3 373 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC124Q96CT7 223 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 BTG4Q9NY30 223 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 LARSQ9P2J5 1176 aaKnown RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TLDC2A0PJX2 215 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 RIMBP2O15034 1052 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 KRT19P08727 400 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 TNNI1P19237 187 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 RPS6KA2Q15349 733 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ASIC2Q16515 512 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CALCRLQ16602 461 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ODR4Q5SWX8 454 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 GKAP1Q5VSY0 366 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC51Q96ER9 411 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 NAPGQ99747 312 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 METTL22Q9BUU2 404 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-201ENST00000283254 RSPH14Q9UHP6 348 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 NUB1Q9Y5A7 615 aa4.49□□□□□ -1.69
SCN3A-201ENST00000283254 ATP2B4P23634 1241 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 FAM47CQ5HY64 1035 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CASC4Q6P4E1 433 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 EP400NLQ6ZTU2 488 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 FAM71BQ8TC56 605 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 PPP2R3CQ969Q6 453 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 NACC1Q96RE7 527 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ATP2C2O75185 946 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 TMEM191BP0C7N4 346 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms