RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 TSPY3P0CV98 308 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TSPY8P0CW00 308 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TSPY1Q01534 308 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CACNB1Q02641 598 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TYRO3Q06418 890 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TPD52L1Q16890 204 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CCAR2Q8N163 923 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 MED23Q9ULK4 1368 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 PFKFB2O60825 505 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 UFL1O94874 794 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SLC16A2P36021 539 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 ZYXQ15942 572 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 ODR4Q5SWX8 454 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 STAG2Q8N3U4 1231 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 DHX58Q96C10 678 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 HELLSQ9NRZ9 838 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 MCM9Q9NXL9 1143 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 MAGEB6P1A0A0J9YX57 407 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TESPA1A2RU30 521 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TMEM232C9JQI7 657 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SORBS3O60504 671 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CD53P19397 219 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 IARSP41252 1262 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 GPSM2P81274 684 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 EXOSC10Q01780 885 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CCDC173Q0VFZ6 552 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CPXCR1Q8N123 301 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SETDB2Q96T68 719 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 KCNF1Q9H3M0 494 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 MINPP1Q9UNW1 487 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 OVOS2A0A0G2JMS6 1433 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 PARNO95453 639 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 GTF2IP78347 998 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 PPARAQ07869 468 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 NAA16Q6N069 864 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 ZSCAN29Q8IWY8 852 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 QTRT2Q9H974 415 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 AKAP2Q9Y2D5 859 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SLC12A7Q9Y666 1083 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 FRMPD2Q68DX3 1309 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TPM1P09493 284 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 RBM5P52756 815 aaKnown RBP eCLIP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 PDE4BQ07343 736 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CCDC183Q5T5S1 534 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SASS6Q6UVJ0 657 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 LPIN2Q92539 896 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 BSDC1Q9NW68 430 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 GRXCR2A6NFK2 248 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CBFA2T2O43439 604 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 LRRFIP1Q32MZ4 808 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 DPCR1Q3MIW9 517 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CCDC152Q4G0S7 254 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 PIK3AP1Q6ZUJ8 805 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 ACRBPQ8NEB7 543 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 RBM46Q8TBY0 533 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SH3RF3Q8TEJ3 882 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CTNNBL1Q8WYA6 563 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 TNKSO95271 1327 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CARNS1A5YM72 827 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 CHRNA5P30532 468 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 HIBADHP31937 336 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 KIF23Q02241 960 aaPredicted RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SKIV2LQ15477 1246 aaKnown RBP4.22□□□□□ -1.73
RAB3C-201ENST00000282878 DLK2Q6UY11 383 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 SCYL1Q96KG9 808 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 FAM210AQ96ND0 272 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 BCAS3Q9H6U6 928 aa4.22□□□□□ -1.73
RAB3C-201ENST00000282878 A0A0U1RQJ8 604 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 UNCXA6NJT0 531 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 ZNF16P17020 682 aaPredicted RBP4.21□□□□□ -1.73
RAB3C-201ENST00000282878 TPD52P55327 224 aaPredicted RBP4.21□□□□□ -1.73
RAB3C-201ENST00000282878 MAP3K12Q12852 859 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 MAP3K11Q16584 847 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 ZNF662Q6ZS27 426 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 FLCNQ8NFG4 579 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.73
RAB3C-201ENST00000282878 TSPAN18Q96SJ8 248 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 VTI1BQ9UEU0 232 aa4.21□□□□□ -1.73
RAB3C-201ENST00000282878 ZBTB43O43298 467 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 RPS8P62241 208 aaKnown RBP4.21□□□□□ -1.74
RAB3C-201ENST00000282878 UBXN2AP68543 259 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 GPS2Q13227 327 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 PRKG1Q13976 671 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 SYNE3Q6ZMZ3 975 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 TMEM260Q9NX78 707 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 COL5A2P05997 1499 aaPredicted RBP4.21□□□□□ -1.74
RAB3C-201ENST00000282878 BECN2A8MW95 431 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 TOM1O60784 492 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 CAND2O75155 1236 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 MECOMQ03112 1051 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 PUM3Q15397 648 aaKnown RBP4.21□□□□□ -1.74
RAB3C-201ENST00000282878 SDE2Q6IQ49 451 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 MFSD6Q6ZSS7 791 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 DEFB132Q7Z7B7 95 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 ZSCAN30Q86W11 494 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 EPSTI1Q96J88 318 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 RMDN2Q96LZ7 410 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 PLSCR2Q9NRY7 297 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 ANKRD33BA6NCL7 494 aa4.21□□□□□ -1.74
RAB3C-201ENST00000282878 PFKFB1P16118 471 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms