RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 METP08581 1390 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 ROBO2Q9HCK4 1378 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 LDHCP07864 332 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 NUDT7P0C024 238 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 KCNJ4P48050 445 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 PIN1Q13526 163 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 MTMR1Q13613 665 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 TEAD4Q15561 434 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.51□□□□□ -1.85
HERC4-201ENST00000277817 DNTTIP2Q5QJE6 756 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 ZNF280DQ6N043 979 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 PPM1EQ8WY54 764 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 E2F7Q96AV8 911 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 TTC14Q96N46 770 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 FHDC1Q9C0D6 1143 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 CAAP1Q9H8G2 361 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 ZFYVE28Q9HCC9 887 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 LUZP4Q9P127 313 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 FANCIQ9NVI1 1328 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 CPSF1Q10570 1443 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 SMAD7O15105 426 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 KIF4AO95239 1232 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 PTPREP23469 700 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 POU5F1Q01860 360 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 TNNI3KQ59H18 835 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 ZNF772Q68DY9 489 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 LHFPL2Q6ZUX7 228 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 CENPQQ7L2Z9 268 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 SCG3Q8WXD2 468 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 EHMT1Q9H9B1 1298 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 SAGE1Q9NXZ1 904 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 SLC45A1Q9Y2W3 748 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 MSH6P52701 1360 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 PSDA5PKW4 1024 aaPredicted RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 LILRA1O75019 489 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 ATE1O95260 518 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 PHKG2P15735 406 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 EIF4A3P38919 411 aaKnown RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 TCEA2Q15560 299 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 TMEM67Q5HYA8 995 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 ICE2Q659A1 982 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 SLC4A10Q6U841 1118 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 OR6P1Q8NGX9 317 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 MFSD3Q96ES6 412 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 EFR3BQ9Y2G0 817 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 WDHD1O75717 1129 aaPredicted RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 COPB2P35606 906 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 TM4SF4P48230 202 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 NBPF14Q5TI25 921 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.5□□□□□ -1.85
HERC4-201ENST00000277817 ZNF296Q8WUU4 475 aaPredicted RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 ANKRD31Q8N7Z5 1873 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 NSD3Q9BZ95 1437 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 MEGF6O75095 1541 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 CPNE3O75131 537 aaKnown RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 BPIP17213 487 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 CALD1Q05682 793 aaKnown RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 ZC3H12BQ5HYM0 836 aaKnown RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 TMEM132EQ6IEE7 984 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 CCDC84Q86UT8 332 aaPredicted RBP3.5□□□□□ -1.85
HERC4-201ENST00000277817 MYO1HQ8N1T3 1032 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 PLD4Q96BZ4 506 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 SPON2Q9BUD6 331 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 DZANK1Q9NVP4 752 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 KIF24Q5T7B8 1368 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 ZNF609O15014 1411 aa3.5□□□□□ -1.85
HERC4-201ENST00000277817 MEIS3P2A8K0S8 358 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 USP17L7P0C7H9 530 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 GPSM2P81274 684 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 LMNB2Q03252 620 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ARSIQ5FYB1 569 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 L1TD1Q5T7N2 865 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 BRINP3Q76B58 766 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 MPNDQ8N594 471 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 SLC13A1Q9BZW2 595 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 MTFR1LQ9H019 292 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 INTS7Q9NVH2 962 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 ZNRF3Q9ULT6 936 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 NAP1L2Q9ULW6 460 aaPredicted RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 PRR36Q9H6K5 1346 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 SCN4AP35499 1836 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ECM29Q5VYK3 1845 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 GABRDO14764 452 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 PIP5K1CO60331 668 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 NPTXRO95502 500 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 SARSP49591 514 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 GDF10P55107 478 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 FAM98CQ17RN3 349 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 RINLQ6ZS11 566 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 FAM196AQ6ZSG2 479 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 SPATC1Q76KD6 591 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ZNF513Q8N8E2 541 aaPredicted RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 NGDNQ8NEJ9 315 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 NELL2Q99435 816 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ARHGAP9Q9BRR9 750 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 CGNL1Q0VF96 1302 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 DNAJC25-GNG10A0A024R161 153 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 GPR39O43194 453 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 RASGRP1O95267 797 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 STAU1O95793 577 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms