RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 MTMR4Q9NYA4 1195 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 TNKSO95271 1327 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 UBE2Q2LH0YL09 131 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 NEK4P51957 841 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 CCDC178Q5BJE1 867 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 RCSD1Q6JBY9 416 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 ENAHQ8N8S7 591 aaPredicted RBP20.25■□□□□ 0.83
SKP2-201ENST00000274254 LRRC2Q9BYS8 371 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 AGXT2Q9BYV1 514 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 CSADQ9Y600 493 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 SNCAIPQ9Y6H5 919 aa20.25■□□□□ 0.83
SKP2-201ENST00000274254 IFIT3O14879 490 aaKnown RBP20.24■□□□□ 0.83
SKP2-201ENST00000274254 SART3Q15020 963 aaKnown RBP20.24■□□□□ 0.83
SKP2-201ENST00000274254 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 CLEC10AQ8IUN9 316 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 SIAH1Q8IUQ4 282 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 IL27Q8NEV9 243 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 ALDH8A1Q9H2A2 487 aaPredicted RBP20.24■□□□□ 0.83
SKP2-201ENST00000274254 PICK1Q9NRD5 415 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
SKP2-201ENST00000274254 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.24■□□□□ 0.83
SKP2-201ENST00000274254 SH2B2O14492 632 aaPredicted RBP20.23■□□□□ 0.83
SKP2-201ENST00000274254 PTPRAP18433 802 aa20.23■□□□□ 0.83
SKP2-201ENST00000274254 TMEM67Q5HYA8 995 aa20.23■□□□□ 0.83
SKP2-201ENST00000274254 CLMNQ96JQ2 1002 aa20.23■□□□□ 0.83
SKP2-201ENST00000274254 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
SKP2-201ENST00000274254 TTLL1O95922 423 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 LIFRP42702 1097 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 ICA1Q05084 483 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 PPP4R3BQ5MIZ7 849 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 Q6ZUG5 572 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 LY9Q9HBG7 655 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 NYAP2Q9P242 653 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 ERICH2A1L162 156 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 USP17L5A8MUK1 530 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 EEF2P13639 858 aaKnown RBP20.22■□□□□ 0.83
SKP2-201ENST00000274254 TOB2Q14106 344 aaPredicted RBP20.22■□□□□ 0.83
SKP2-201ENST00000274254 SENP2Q9HC62 589 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 STX8Q9UNK0 236 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 PHIPQ8WWQ0 1821 aa20.22■□□□□ 0.83
SKP2-201ENST00000274254 WTAPQ15007 396 aa20.21■□□□□ 0.83
SKP2-201ENST00000274254 SAPCD2Q86UD0 394 aa20.21■□□□□ 0.83
SKP2-201ENST00000274254 CCDC84Q86UT8 332 aaPredicted RBP20.21■□□□□ 0.83
SKP2-201ENST00000274254 SGMS1Q86VZ5 419 aa20.21■□□□□ 0.83
SKP2-201ENST00000274254 TMTC2Q8N394 836 aa20.21■□□□□ 0.83
SKP2-201ENST00000274254 MKL1Q969V6 931 aa20.21■□□□□ 0.83
SKP2-201ENST00000274254 WDR18Q9BV38 432 aa20.21■□□□□ 0.83
SKP2-201ENST00000274254 MYH4Q9Y623 1939 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 SPDYE5A6NIY4 337 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 IFIT1BQ5T764 474 aaKnown RBP20.2■□□□□ 0.82
SKP2-201ENST00000274254 ERO1BQ86YB8 467 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 TMEM47Q9BQJ4 181 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 TBC1D2Q9BYX2 928 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 ELP3Q9H9T3 547 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 SYNPO2Q9UMS6 1093 aa20.2■□□□□ 0.82
SKP2-201ENST00000274254 A0A1W2PRG0 241 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 TMEM88BA6NKF7 163 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 TOP1P11387 765 aaKnown RBP20.19■□□□□ 0.82
SKP2-201ENST00000274254 AK2P54819 239 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 HUNKP57058 714 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 FGD1P98174 961 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 BRF1Q92994 677 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 ARHGEF10LQ9HCE6 1279 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 TLL2Q9Y6L7 1015 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 ZHX2Q9Y6X8 837 aa20.19■□□□□ 0.82
SKP2-201ENST00000274254 ST18O60284 1047 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 ECE1P42892 770 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 EVCP57679 992 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 PPATQ06203 517 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 ZNF280CQ8ND82 737 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 SLC10A4Q96EP9 437 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 AS3MTQ9HBK9 375 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 TMX2Q9Y320 296 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 AFG3L2Q9Y4W6 797 aa20.18■□□□□ 0.82
SKP2-201ENST00000274254 ATP2B2Q01814 1243 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 CD2BP2O95400 341 aaKnown RBP20.17■□□□□ 0.82
SKP2-201ENST00000274254 SPP2Q13103 211 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 LRRC47Q8N1G4 583 aaKnown RBP20.17■□□□□ 0.82
SKP2-201ENST00000274254 OPTNQ96CV9 577 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 KIAA1683Q9H0B3 1180 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 TSHZ2Q9NRE2 1034 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 BRPF3Q9ULD4 1205 aa20.17■□□□□ 0.82
SKP2-201ENST00000274254 APLP1P51693 650 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 APOBRQ0VD83 1088 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 PPIL2Q13356 520 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 APOA5Q6Q788 366 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 NFXL1Q6ZNB6 911 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 PNMA1Q8ND90 353 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 HHIPL1Q96JK4 782 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 SH2D4AQ9H788 454 aa20.16■□□□□ 0.82
SKP2-201ENST00000274254 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 USP17L10C9JJH3 530 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms