RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 SPATA31A1Q5TZJ5 1347 aa27.47■■□□□ 1.99
SH3GL1-201ENST00000269886 CACNA1SQ13698 1873 aa27.47■■□□□ 1.99
SH3GL1-201ENST00000269886 PRPF3O43395 683 aaKnown RBP27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 TROAPQ12815 778 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 UBE4AQ14139 1066 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 CAVIN4Q5BKX8 364 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 SPECC1LQ69YQ0 1117 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 FAM84BQ96KN1 310 aaPredicted RBP27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 BAG1Q99933 345 aaPredicted RBP27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 AATFQ9NY61 560 aaKnown RBP eCLIP27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 MORC2Q9Y6X9 1032 aaPredicted RBP27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 PHLPP2Q6ZVD8 1323 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 ARHGAP6O43182 974 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 FAM177A1Q8N128 213 aaPredicted RBP27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 TC2NQ8N9U0 490 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 MINPP1Q9UNW1 487 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 PPP2R2CQ9Y2T4 447 aa27.46■■□□□ 1.99
SH3GL1-201ENST00000269886 CTR9Q6PD62 1173 aa27.45■■□□□ 1.99
SH3GL1-201ENST00000269886 NUTM2AQ8IVF1 878 aaPredicted RBP27.45■■□□□ 1.99
SH3GL1-201ENST00000269886 BRIP1Q9BX63 1249 aa27.45■■□□□ 1.99
SH3GL1-201ENST00000269886 ZNF652Q9Y2D9 606 aa27.45■■□□□ 1.99
SH3GL1-201ENST00000269886 DUOX1Q9NRD9 1551 aa27.45■■□□□ 1.99
SH3GL1-201ENST00000269886 LAMB2P55268 1798 aa27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 USP17L12C9JPN9 530 aa27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 USP17L21D6R901 530 aa27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 IGSF3O75054 1194 aa27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 PLCD1P51178 756 aa27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 UTP14CQ5TAP6 766 aaKnown RBP27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 IQCA1Q86XH1 822 aa27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 SYMPKQ92797 1274 aaKnown RBP27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 CDCA7Q9BWT1 371 aaPredicted RBP27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 BSDC1Q9NW68 430 aaPredicted RBP27.45■■□□□ 1.98
SH3GL1-201ENST00000269886 VWA3AA6NCI4 1184 aa27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 KCNQ2O43526 872 aa27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 NMT2O60551 498 aa27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 KLRK1P26718 216 aa27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 ZNF174Q15697 407 aa27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 BICDL1Q6ZP65 573 aa27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 CELF1Q92879 486 aaKnown RBP27.44■■□□□ 1.98
SH3GL1-201ENST00000269886 ZSCAN12O43309 604 aa27.43■■□□□ 1.98
SH3GL1-201ENST00000269886 KLHL10Q6JEL2 608 aa27.43■■□□□ 1.98
SH3GL1-201ENST00000269886 FCHSD1Q86WN1 690 aa27.43■■□□□ 1.98
SH3GL1-201ENST00000269886 SMIM5Q71RC9 77 aa27.43■■□□□ 1.98
SH3GL1-201ENST00000269886 GTPBP4Q9BZE4 634 aaKnown RBP27.43■■□□□ 1.98
SH3GL1-201ENST00000269886 RREB1Q92766 1687 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 CD44P16070 742 aaKnown RBP27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 KCNQ4P56696 695 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 STX17P56962 302 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 SF3B3Q15393 1217 aaKnown RBP27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 NPY5RQ15761 445 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 TOGARAM2Q6ZUX3 1019 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 PAGE5Q96GU1 130 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 NOL10Q9BSC4 688 aaKnown RBP27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 ZHX1Q9UKY1 873 aaPredicted RBP27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 URI1O94763 535 aaPredicted RBP27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 SLFN14P0C7P3 912 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 NR1I3Q14994 352 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 RBM28Q9NW13 759 aaKnown RBP27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 ZNF446Q9NWS9 450 aa27.42■■□□□ 1.98
SH3GL1-201ENST00000269886 FGRP09769 529 aa27.41■■□□□ 1.98
SH3GL1-201ENST00000269886 ERCC5P28715 1186 aaPredicted RBP27.41■■□□□ 1.98
SH3GL1-201ENST00000269886 STX10O60499 249 aa27.41■■□□□ 1.98
SH3GL1-201ENST00000269886 TMTC3Q6ZXV5 915 aa27.41■■□□□ 1.98
SH3GL1-201ENST00000269886 SMYD4Q8IYR2 804 aaPredicted RBP27.41■■□□□ 1.98
SH3GL1-201ENST00000269886 TNFRSF25Q93038 417 aa27.41■■□□□ 1.98
SH3GL1-201ENST00000269886 COL22A1Q8NFW1 1626 aaPredicted RBP27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 FAM47AQ5JRC9 791 aa27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 SRBD1Q8N5C6 995 aaKnown RBP27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 TEX33O43247 280 aa27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 SH3RF1Q7Z6J0 888 aa27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 STAMQ92783 540 aa27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 NSUN4Q96CB9 384 aaKnown RBP27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 PARP3Q9Y6F1 533 aa27.4■■□□□ 1.98
SH3GL1-201ENST00000269886 H2AFXP16104 143 aaPredicted RBP27.39■■□□□ 1.98
SH3GL1-201ENST00000269886 MECOMQ03112 1051 aa27.39■■□□□ 1.98
SH3GL1-201ENST00000269886 ARHGAP29Q52LW3 1261 aa27.39■■□□□ 1.98
SH3GL1-201ENST00000269886 CLEC4GQ6UXB4 293 aa27.39■■□□□ 1.98
SH3GL1-201ENST00000269886 CNTNAP5Q8WYK1 1306 aa27.39■■□□□ 1.98
SH3GL1-201ENST00000269886 A0A1B0GTH6 734 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 CALM1P0DP23 149 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 CALM2P0DP24 149 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 CALM3P0DP25 149 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 TTC38Q5R3I4 469 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 FERMT2Q96AC1 680 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 BRMS1Q9HCU9 246 aa27.39■■□□□ 1.97
SH3GL1-201ENST00000269886 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 PTGDRQ13258 359 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 APTXQ7Z2E3 356 aaKnown RBP27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 WDR24Q96S15 920 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 THRAP3Q9Y2W1 955 aaKnown RBP27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 BAZ2BQ9UIF8 2168 aaKnown RBP27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 DDAH1O94760 285 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 VEGFAP15692 232 aaPredicted RBP27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 DPYDQ12882 1025 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 CUL4BQ13620 913 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 DESI2Q9BSY9 194 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 TFCP2L1Q9NZI6 479 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.38■■□□□ 1.972e-8■■■■□ 21
SH3GL1-201ENST00000269886 A0A1B0GUL6 1792 aa27.38■■□□□ 1.97
SH3GL1-201ENST00000269886 CYP2D6P10635 497 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms