RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ERICH2A1L162 156 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 VGLL3A8MV65 326 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 MAP3K12Q12852 859 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 GPS2Q13227 327 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 SART3Q15020 963 aaKnown RBP31.24■■■□□ 2.59
CBX4-201ENST00000269397 PDE11AQ9HCR9 933 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 CDC23Q9UJX2 597 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 RHOXF2BP0C7M4 288 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 UQCRFS1P1P0C7P4 283 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 CUL4BQ13620 913 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 ZNF654Q8IZM8 581 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 SYMPKQ92797 1274 aaKnown RBP31.24■■■□□ 2.59
CBX4-201ENST00000269397 PAGE5Q96GU1 130 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 RHOXF2Q9BQY4 288 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 CEP131Q9UPN4 1083 aa31.24■■■□□ 2.59
CBX4-201ENST00000269397 IL2RBP14784 551 aa31.23■■■□□ 2.59
CBX4-201ENST00000269397 NKX1-1Q15270 411 aaPredicted RBP31.23■■■□□ 2.59
CBX4-201ENST00000269397 MFAP3LO75121 409 aa31.23■■■□□ 2.59
CBX4-201ENST00000269397 CDC25AP30304 524 aa31.23■■■□□ 2.59
CBX4-201ENST00000269397 SLC35F6Q8N357 371 aa31.23■■■□□ 2.59
CBX4-201ENST00000269397 SPATA31A3Q5VYP0 1347 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 GYPCP04921 128 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 NOM1Q5C9Z4 860 aaKnown RBP31.22■■■□□ 2.59
CBX4-201ENST00000269397 DPYDQ12882 1025 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 BRD3Q15059 726 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 PUM3Q15397 648 aaKnown RBP31.22■■■□□ 2.59
CBX4-201ENST00000269397 ZSCAN26Q16670 478 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 PLEKHG2Q9H7P9 1386 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 CDHR2Q9BYE9 1310 aa31.22■■■□□ 2.59
CBX4-201ENST00000269397 TRIM75PA6NK02 468 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 PBX1P40424 430 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 TNS2Q63HR2 1409 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 MAP2K7O14733 419 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 JAKMIP3Q5VZ66 844 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 LPIN2Q92539 896 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 LRP6O75581 1613 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 N4BP1O75113 896 aaKnown RBP31.21■■■□□ 2.59
CBX4-201ENST00000269397 BEND6Q5SZJ8 279 aaPredicted RBP31.21■■■□□ 2.59
CBX4-201ENST00000269397 CTNND2Q9UQB3 1225 aa31.21■■■□□ 2.59
CBX4-201ENST00000269397 CHD4Q14839 1912 aa31.2■■■□□ 2.59
CBX4-201ENST00000269397 CDKAL1Q5VV42 579 aa31.2■■■□□ 2.59
CBX4-201ENST00000269397 ZFP91Q96JP5 570 aaPredicted RBP31.2■■■□□ 2.59
CBX4-201ENST00000269397 BLZF1Q9H2G9 400 aa31.2■■■□□ 2.59
CBX4-201ENST00000269397 VPS18Q9P253 973 aa31.2■■■□□ 2.59
CBX4-201ENST00000269397 MINDY4BA8MYZ0 360 aa31.2■■■□□ 2.58
CBX4-201ENST00000269397 RNF225M0QZC1 329 aaPredicted RBP31.2■■■□□ 2.58
CBX4-201ENST00000269397 RASGRP2Q7LDG7 609 aa31.2■■■□□ 2.58
CBX4-201ENST00000269397 STAG1Q8WVM7 1258 aa31.2■■■□□ 2.58
CBX4-201ENST00000269397 ABCB6Q9NP58 842 aa31.2■■■□□ 2.58
CBX4-201ENST00000269397 PPP1R3GB7ZBB8 358 aa31.19■■■□□ 2.58
CBX4-201ENST00000269397 ZNF174Q15697 407 aa31.19■■■□□ 2.58
CBX4-201ENST00000269397 UBAC1Q9BSL1 405 aa31.19■■■□□ 2.58
CBX4-201ENST00000269397 AATFQ9NY61 560 aaKnown RBP eCLIP31.19■■■□□ 2.588e-7■■□□□ 12.5
CBX4-201ENST00000269397 CEP112Q8N8E3 955 aa31.19■■■□□ 2.58
CBX4-201ENST00000269397 NAA15Q9BXJ9 866 aaKnown RBP31.19■■■□□ 2.58
CBX4-201ENST00000269397 CCDC196A0A1B0GTZ2 297 aa31.18■■■□□ 2.58
CBX4-201ENST00000269397 CTAGE9A4FU28 777 aa31.18■■■□□ 2.58
CBX4-201ENST00000269397 PIGBQ92521 554 aa31.18■■■□□ 2.58
CBX4-201ENST00000269397 VPS16Q9H269 839 aa31.18■■■□□ 2.58
CBX4-201ENST00000269397 FILIP1LQ4L180 1135 aa31.18■■■□□ 2.58
CBX4-201ENST00000269397 NACAP1Q9BZK3 213 aa31.18■■■□□ 2.58
CBX4-201ENST00000269397 STARD3NLO95772 234 aa31.17■■■□□ 2.58
CBX4-201ENST00000269397 ERVK-24P63145 666 aa31.17■■■□□ 2.58
CBX4-201ENST00000269397 AKAP17AQ02040 695 aaKnown RBP31.17■■■□□ 2.58
CBX4-201ENST00000269397 SDR42E1Q8WUS8 393 aa31.17■■■□□ 2.58
CBX4-201ENST00000269397 IQSEC3Q9UPP2 1182 aaPredicted RBP31.17■■■□□ 2.58
CBX4-201ENST00000269397 MYH8P13535 1937 aa31.17■■■□□ 2.58
CBX4-201ENST00000269397 FGFR2P21802 821 aa31.17■■■□□ 2.58
CBX4-201ENST00000269397 AK7Q96M32 723 aa31.17■■■□□ 2.58
CBX4-201ENST00000269397 KAT6BQ8WYB5 2073 aa31.16■■■□□ 2.58
CBX4-201ENST00000269397 BCAMP50895 628 aa31.16■■■□□ 2.58
CBX4-201ENST00000269397 SH3RF1Q7Z6J0 888 aa31.16■■■□□ 2.58
CBX4-201ENST00000269397 PDE8AO60658 829 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 VSNL1P62760 191 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 PAPPAQ13219 1627 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 TNKSO95271 1327 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 NID2Q14112 1375 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 N4BP3O15049 544 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 PKN1Q16512 942 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 LCMT1Q9UIC8 334 aa31.15■■■□□ 2.58
CBX4-201ENST00000269397 V9GY48 417 aaPredicted RBP31.15■■■□□ 2.58
CBX4-201ENST00000269397 KRT31Q15323 416 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 MUM1L1Q5H9M0 696 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 CNGA4Q8IV77 575 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 EXOC4Q96A65 974 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 CTAGE1Q96RT6 745 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 FEZ2Q9UHY8 353 aaPredicted RBP31.14■■■□□ 2.58
CBX4-201ENST00000269397 SLC5A1P13866 664 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 HDXQ7Z353 690 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 NUP88Q99567 741 aaPredicted RBP31.14■■■□□ 2.58
CBX4-201ENST00000269397 SLF1Q9BQI6 1058 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 TAB2Q9NYJ8 693 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 MAPK8IP1Q9UQF2 711 aa31.14■■■□□ 2.58
CBX4-201ENST00000269397 PLEKHA8P1O95397 391 aa31.13■■■□□ 2.57
CBX4-201ENST00000269397 KRT2P35908 639 aa31.13■■■□□ 2.57
CBX4-201ENST00000269397 PPARAQ07869 468 aa31.13■■■□□ 2.57
CBX4-201ENST00000269397 RAB21Q9UL25 225 aa31.13■■■□□ 2.57
CBX4-201ENST00000269397 BAZ2BQ9UIF8 2168 aaKnown RBP31.13■■■□□ 2.57
CBX4-201ENST00000269397 PHACTR2O75167 634 aa31.13■■■□□ 2.57
CBX4-201ENST00000269397 GSDMAQ96QA5 445 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms