RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PRRT2Q7Z6L0 340 aaPredicted RBP15.12■□□□□ 0.01
SS18-202ENST00000269138 PHIPQ8WWQ0 1821 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 IGKV6D-41A0A0C4DH26 115 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 BTBD19C9JJ37 291 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 HMGCS2P54868 508 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 BACE1P56817 501 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 NEDD1Q8NHV4 660 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 WBP1LQ9NX94 342 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 USP17L10C9JJH3 530 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 NMT2O60551 498 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 TSPY3P0CV98 308 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 TSPY8P0CW00 308 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 EEF2P13639 858 aaKnown RBP15.11■□□□□ 0.01
SS18-202ENST00000269138 INHBEP58166 350 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 ATP2B2Q01814 1243 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
SS18-202ENST00000269138 ICA1Q05084 483 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 NECTIN1Q15223 517 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
SS18-202ENST00000269138 GPAT2Q6NUI2 795 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 GADL1Q6ZQY3 521 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
SS18-202ENST00000269138 FAM43AQ8N2R8 423 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 RNF41Q9H4P4 317 aaPredicted RBP15.11■□□□□ 0.01
SS18-202ENST00000269138 KANSL2Q9H9L4 492 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
SS18-202ENST00000269138 TSPY2A6NKD2 308 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 SLC27A2O14975 620 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 SH3D19Q5HYK7 790 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 CREB3L3Q68CJ9 461 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 CEP95Q96GE4 821 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 FEZ1Q99689 392 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 IL17RBQ9NRM6 502 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 EMILIN3Q9NT22 766 aa15.1■□□□□ 0.01
SS18-202ENST00000269138 B4E1Z4 1266 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 TRPA1O75762 1119 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 PCP11498 1178 aaKnown RBP15.09■□□□□ 0.01
SS18-202ENST00000269138 KIAA1755Q5JYT7 1200 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 TREML2Q5T2D2 321 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 KIAA1683Q9H0B3 1180 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 R3HDMLQ9H3Y0 253 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 MTMR4Q9NYA4 1195 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
SS18-202ENST00000269138 MYH8P13535 1937 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 C19orf81C9J6K1 198 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 E7EWF7 191 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 KDM4AO75164 1064 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 HSPA1AP0DMV8 641 aaKnown RBP15.08■□□□□ 0.01
SS18-202ENST00000269138 HSPA1BP0DMV9 641 aaKnown RBP15.08■□□□□ 0.01
SS18-202ENST00000269138 USP17L2Q6R6M4 530 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 FASTKD5Q7L8L6 764 aaKnown RBP15.08■□□□□ 0.01
SS18-202ENST00000269138 ARHGEF10LQ9HCE6 1279 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 NYAP2Q9P242 653 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 CLIP2Q9UDT6 1046 aa15.08■□□□□ 0.01
SS18-202ENST00000269138 LAMA4Q16363 1823 aa15.08■□□□□ 0
SS18-202ENST00000269138 PDHXO00330 501 aa15.07■□□□□ 0
SS18-202ENST00000269138 REC8O95072 547 aa15.07■□□□□ 0
SS18-202ENST00000269138 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
SS18-202ENST00000269138 ANKRD23Q86SG2 305 aa15.07■□□□□ 0
SS18-202ENST00000269138 RASEFQ8IZ41 740 aa15.07■□□□□ 0
SS18-202ENST00000269138 PROCA1Q8NCQ7 364 aaPredicted RBP15.07■□□□□ 0
SS18-202ENST00000269138 ESR2Q92731 530 aa15.07■□□□□ 0
SS18-202ENST00000269138 ZKSCAN3Q9BRR0 538 aa15.07■□□□□ 0
SS18-202ENST00000269138 TMOD4Q9NZQ9 345 aa15.07■□□□□ 0
SS18-202ENST00000269138 ZSWIM5Q9P217 1185 aa15.07■□□□□ 0
SS18-202ENST00000269138 TMX2Q9Y320 296 aa15.07■□□□□ 0
SS18-202ENST00000269138 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
SS18-202ENST00000269138 FOXN1O15353 648 aa15.07■□□□□ 0
SS18-202ENST00000269138 TBC1D8O95759 1140 aa15.07■□□□□ 0
SS18-202ENST00000269138 OTUD7BQ6GQQ9 843 aa15.07■□□□□ 0
SS18-202ENST00000269138 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
SS18-202ENST00000269138 BEGAINQ9BUH8 593 aa15.07■□□□□ 0
SS18-202ENST00000269138 KRT23Q9C075 422 aa15.07■□□□□ 0
SS18-202ENST00000269138 AGTPBP1Q9UPW5 1226 aa15.07■□□□□ 0
SS18-202ENST00000269138 PCNTO95613 3336 aa15.06■□□□□ 0
SS18-202ENST00000269138 SEC24BO95487 1268 aa15.06■□□□□ 0
SS18-202ENST00000269138 TTLL1O95922 423 aa15.06■□□□□ 0
SS18-202ENST00000269138 USP14P54578 494 aa15.06■□□□□ 0
SS18-202ENST00000269138 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
SS18-202ENST00000269138 LRRC47Q8N1G4 583 aaKnown RBP15.06■□□□□ 0
SS18-202ENST00000269138 C12orf42Q96LP6 360 aa15.06■□□□□ 0
SS18-202ENST00000269138 USP26Q9BXU7 913 aa15.06■□□□□ 0
SS18-202ENST00000269138 VCPKMTQ9H867 229 aa15.06■□□□□ 0
SS18-202ENST00000269138 CNNM2Q9H8M5 875 aa15.06■□□□□ 0
SS18-202ENST00000269138 TCP11L1Q9NUJ3 509 aa15.06■□□□□ 0
SS18-202ENST00000269138 PTPRFP10586 1907 aa15.05■□□□□ -0
SS18-202ENST00000269138 ALDH1A1P00352 501 aa15.05■□□□□ -0
SS18-202ENST00000269138 CYP2C8P10632 490 aa15.05■□□□□ -0
SS18-202ENST00000269138 VCAM1P19320 739 aa15.05■□□□□ -0
SS18-202ENST00000269138 NOVP48745 357 aa15.05■□□□□ -0
SS18-202ENST00000269138 CRHR2Q13324 411 aa15.05■□□□□ -0
SS18-202ENST00000269138 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ -0
SS18-202ENST00000269138 C8orf34Q49A92 452 aa15.05■□□□□ -0
SS18-202ENST00000269138 RCSD1Q6JBY9 416 aa15.05■□□□□ -0
SS18-202ENST00000269138 MKL1Q969V6 931 aa15.05■□□□□ -0
SS18-202ENST00000269138 CHMP4CQ96CF2 233 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms