RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 B4E1Z4 1266 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 RNF225M0QZC1 329 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 CHRM1P11229 460 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 ADORA1P30542 326 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 TMEM87BQ96K49 555 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 GDAP1L1Q96MZ0 367 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 CSRNP2Q9H175 543 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 TRIM10Q9UDY6 481 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 GUCA1BQ9UMX6 200 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 FAM169AQ9Y6X4 670 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 PSMD14O00487 310 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 EBAG9O00559 213 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 FMNL1O95466 1100 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 CDC25AP30304 524 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 IRAK1P51617 712 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 SCARF1Q14162 830 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 WASF1Q92558 559 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
SCAMP2-201ENST00000268099 AGPSO00116 658 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 ENC1O14682 589 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 ZAP70P43403 619 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 AFMP43652 599 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 NBPF14Q5TI25 921 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 SMYD4Q8IYR2 804 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 GOLGA6CA6NDK9 693 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 N4BP3O15049 544 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 GOLGA6DP0CG33 693 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 KRT31Q15323 416 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 XAGE2Q96GT9 111 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 SELENOOQ9BVL4 669 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 GOLGA6AQ9NYA3 693 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 REXO2Q9Y3B8 237 aaKnown RBP17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 SAR1BQ9Y6B6 198 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 TJP1Q07157 1748 aa17.39■□□□□ 0.37
SCAMP2-201ENST00000268099 ARHGAP23Q9P227 1491 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 CASP1P29466 404 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 GUCY1A2P33402 732 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 TRIM14Q14142 442 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 SGMS1Q86VZ5 419 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 RPGRIP1Q96KN7 1286 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 CEP131Q9UPN4 1083 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 ZMYND10O75800 440 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 NDUFA10O95299 355 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 ATP1A1P05023 1023 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 KRT9P35527 623 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 GSCP56915 257 aaPredicted RBP17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 TMEM67Q5HYA8 995 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 GSPT2Q8IYD1 628 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 CWC25Q9NXE8 425 aaPredicted RBP17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 LIMA1Q9UHB6 759 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 EPN1Q9Y6I3 576 aaPredicted RBP17.38■□□□□ 0.37
SCAMP2-201ENST00000268099 A0A087X0B3 334 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 SRGAP2O75044 1071 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 GCP02774 474 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 HNRNPH1P31943 449 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 CEBPAP49715 358 aaPredicted RBP17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 PPFIA1Q13136 1202 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 CHP1Q99653 195 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 CTNND2Q9UQB3 1225 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 GOLGA6BA6NDN3 693 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 MYBL2P10244 700 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 IFNAR1P17181 557 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 CKAP4Q07065 602 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 NR5A1Q13285 461 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 PAPD7Q5XG87 772 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 CAPZA3Q96KX2 299 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 GSDMAQ96QA5 445 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 VPS16Q9H269 839 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 HAUS4Q9H6D7 363 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 AXIN2Q9Y2T1 843 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
SCAMP2-201ENST00000268099 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 MMP14P50281 582 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 DPYDQ12882 1025 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 CCNI2Q6ZMN8 369 aaPredicted RBP17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 LRRC10BA6NIK2 292 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 COPB1P53618 953 aaKnown RBP17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 FBXW10Q5XX13 1052 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 KCNV1Q6PIU1 500 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 BCAS4Q8TDM0 211 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 CAPS2Q9BXY5 557 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 EHD4Q9H223 541 aa17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAMP2-201ENST00000268099 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms