RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 KRT23Q9C075 422 aa19.1■□□□□ 0.65
SQLE-201ENST00000265896 H3BQF6 201 aa19.1■□□□□ 0.65
SQLE-201ENST00000265896 STX10O60499 249 aa19.1■□□□□ 0.65
SQLE-201ENST00000265896 PTGDRQ13258 359 aa19.1■□□□□ 0.65
SQLE-201ENST00000265896 RRAGBQ5VZM2 374 aa19.1■□□□□ 0.65
SQLE-201ENST00000265896 ENAHQ8N8S7 591 aaPredicted RBP19.1■□□□□ 0.65
SQLE-201ENST00000265896 ENOX1Q8TC92 643 aaKnown RBP19.1■□□□□ 0.65
SQLE-201ENST00000265896 PNKPQ96T60 521 aa19.1■□□□□ 0.65
SQLE-201ENST00000265896 SRPRBQ9Y5M8 271 aaKnown RBP19.1■□□□□ 0.65
SQLE-201ENST00000265896 TRIM49BA6NDI0 452 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 PP2D1A8MPX8 630 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 CCP110O43303 1012 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 CCDC175P0C221 793 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 UQCRFS1P1P0C7P4 283 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 CUL4BQ13620 913 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 SLC35F6Q8N357 371 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 ARFGAP3Q9NP61 516 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 GDAQ9Y2T3 454 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 N4BP3O15049 544 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 LMAN1P49257 510 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 SARSP49591 514 aaKnown RBP19.09■□□□□ 0.65
SQLE-201ENST00000265896 PLCD1P51178 756 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 PLA2G12BQ9BX93 195 aa19.09■□□□□ 0.65
SQLE-201ENST00000265896 ZMYND10O75800 440 aa19.08■□□□□ 0.65
SQLE-201ENST00000265896 CYP2D6P10635 497 aa19.08■□□□□ 0.65
SQLE-201ENST00000265896 MRPS25P82663 173 aaKnown RBP19.08■□□□□ 0.65
SQLE-201ENST00000265896 NCAPH2Q6IBW4 605 aa19.08■□□□□ 0.65
SQLE-201ENST00000265896 RASSF8Q8NHQ8 419 aa19.08■□□□□ 0.65
SQLE-201ENST00000265896 NUP88Q99567 741 aaPredicted RBP19.08■□□□□ 0.65
SQLE-201ENST00000265896 ADGRG1Q9Y653 693 aa19.08■□□□□ 0.65
SQLE-201ENST00000265896 CHMP4BP1P59074 171 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 DHX8Q14562 1220 aaKnown RBP19.08■□□□□ 0.64
SQLE-201ENST00000265896 PKN1Q16512 942 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 IFIT1BQ5T764 474 aaKnown RBP19.08■□□□□ 0.64
SQLE-201ENST00000265896 GPKOWQ92917 476 aaPredicted RBP eCLIP19.08■□□□□ 0.644e-7■□□□□ 10.4
SQLE-201ENST00000265896 ANKRD65E5RJM6 399 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 FGFR2P21802 821 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 KLRK1P26718 216 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 CHRNDQ07001 517 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 WASF1Q92558 559 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 CHP1Q99653 195 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 PDE11AQ9HCR9 933 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 HDAC6Q9UBN7 1215 aa19.08■□□□□ 0.64
SQLE-201ENST00000265896 GYPCP04921 128 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 NKX1-1Q15270 411 aaPredicted RBP19.07■□□□□ 0.64
SQLE-201ENST00000265896 LONRF2Q1L5Z9 754 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 RGS22Q8NE09 1264 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 FOXP1Q9H334 677 aaPredicted RBP19.07■□□□□ 0.64
SQLE-201ENST00000265896 PLEKHA4Q9H4M7 779 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 SRGAP2O75044 1071 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 CYP2C19P33261 490 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 C3orf67Q6ZVT6 689 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 APTXQ7Z2E3 356 aaKnown RBP19.07■□□□□ 0.64
SQLE-201ENST00000265896 CPVLQ9H3G5 476 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 GUCA1BQ9UMX6 200 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 NIP7Q9Y221 180 aaKnown RBP eCLIP19.07■□□□□ 0.64
SQLE-201ENST00000265896 WDR19Q8NEZ3 1342 aa19.07■□□□□ 0.64
SQLE-201ENST00000265896 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 FAM237AA0A1B0GTK4 181 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 KCNJ6P48051 423 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 FKBP15Q5T1M5 1219 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 RASGRP2Q7LDG7 609 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.06■□□□□ 0.64
SQLE-201ENST00000265896 AKAP11Q9UKA4 1901 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 USP17L12C9JPN9 530 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 USP17L21D6R901 530 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 GOLGA1Q92805 767 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 CAPZA3Q96KX2 299 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 TFCP2L1Q9NZI6 479 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 VPS18Q9P253 973 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
SQLE-201ENST00000265896 KIF1AQ12756 1690 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 A0A1B0GTH6 734 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 KRT2P35908 639 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 ERVK-24P63145 666 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 IRX5P78411 483 aaPredicted RBP19.05■□□□□ 0.64
SQLE-201ENST00000265896 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 C4BP0C0L5 1744 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 KIF5CO60282 957 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 NOA1Q8NC60 698 aaKnown RBP19.05■□□□□ 0.64
SQLE-201ENST00000265896 STAG1Q8WVM7 1258 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 MTRQ99707 1265 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 FUT8Q9BYC5 575 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 AATFQ9NY61 560 aaKnown RBP eCLIP19.05■□□□□ 0.64
SQLE-201ENST00000265896 ADD3Q9UEY8 706 aaKnown RBP19.05■□□□□ 0.64
SQLE-201ENST00000265896 COL18A1P39060 1754 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 PPP1R3GB7ZBB8 358 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 KRT31Q15323 416 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
SQLE-201ENST00000265896 COL5A2P05997 1499 aaPredicted RBP19.04■□□□□ 0.64
SQLE-201ENST00000265896 CCDC66A2RUB6 948 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 SPATA1Q5VX52 437 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 DACH1Q9UI36 760 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
SQLE-201ENST00000265896 NLRP5P59047 1200 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 IL17AQ16552 155 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms