RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 NFIXQ14938 502 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 PFKFB3Q16875 520 aaPredicted RBP12.82□□□□□ -0.36
MSH3-201ENST00000265081 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
MSH3-201ENST00000265081 DAGLBQ8NCG7 672 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
MSH3-201ENST00000265081 NGLY1Q96IV0 654 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 GJD4Q96KN9 370 aaPredicted RBP12.82□□□□□ -0.36
MSH3-201ENST00000265081 PNOCQ13519 176 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 MPNDQ8N594 471 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 WDR66Q8TBY9 1149 aa12.82□□□□□ -0.36
MSH3-201ENST00000265081 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
MSH3-201ENST00000265081 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 BECN2A8MW95 431 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 RRP12Q5JTH9 1297 aaKnown RBP12.81□□□□□ -0.36
MSH3-201ENST00000265081 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 RTFDC1Q9BY42 306 aaPredicted RBP12.81□□□□□ -0.36
MSH3-201ENST00000265081 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 MYL5Q02045 173 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 TBX2Q13207 712 aaPredicted RBP12.81□□□□□ -0.36
MSH3-201ENST00000265081 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 ARMCX5Q6P1M9 558 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
MSH3-201ENST00000265081 GAKO14976 1311 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 XPO4Q9C0E2 1151 aaKnown RBP12.8□□□□□ -0.36
MSH3-201ENST00000265081 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
MSH3-201ENST00000265081 PSME4Q14997 1843 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 GRM4Q14833 912 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 POSTNQ15063 836 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 E2F4Q16254 413 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 MED15Q96RN5 788 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
MSH3-201ENST00000265081 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 PCDHA5Q9Y5H7 936 aa12.8□□□□□ -0.36
MSH3-201ENST00000265081 A0A087X0B3 334 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 WNT7AO00755 349 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 XBP1P17861 261 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 PDE4BQ07343 736 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
MSH3-201ENST00000265081 INTS13Q9NVM9 706 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 TFCP2L1Q9NZI6 479 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 GSTO1P78417 241 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 ARID5BQ14865 1188 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 ENOX1Q8TC92 643 aaKnown RBP12.79□□□□□ -0.36
MSH3-201ENST00000265081 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 FAM13BQ9NYF5 915 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 MLKLQ8NB16 471 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
MSH3-201ENST00000265081 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
MSH3-201ENST00000265081 CYP2D6P10635 497 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 GYS1P13807 737 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 FANCCQ00597 558 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
MSH3-201ENST00000265081 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 APTXQ7Z2E3 356 aaKnown RBP12.78□□□□□ -0.36
MSH3-201ENST00000265081 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 GPR75-ASB3A0A0A6YYF3 556 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 SCG2P13521 617 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
MSH3-201ENST00000265081 CNNM3Q8NE01 707 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 FOXN1O15353 648 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
MSH3-201ENST00000265081 TMEM139Q8IV31 216 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 CABP5Q9NP86 173 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 HOOK1Q9UJC3 728 aaKnown RBP12.78□□□□□ -0.36
MSH3-201ENST00000265081 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 SLFN14P0C7P3 912 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 DPYDQ12882 1025 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 IFNKQ9P0W0 207 aa12.78□□□□□ -0.36
MSH3-201ENST00000265081 NMT2O60551 498 aa12.77□□□□□ -0.36
MSH3-201ENST00000265081 TPM4P67936 248 aa12.77□□□□□ -0.36
MSH3-201ENST00000265081 GPSM2P81274 684 aa12.77□□□□□ -0.36
MSH3-201ENST00000265081 CUL4BQ13620 913 aa12.77□□□□□ -0.36
MSH3-201ENST00000265081 GRIK5Q16478 980 aa12.77□□□□□ -0.36
MSH3-201ENST00000265081 ARL6IP4Q66PJ3 421 aaKnown RBP12.77□□□□□ -0.36
MSH3-201ENST00000265081 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.36
MSH3-201ENST00000265081 SLC51AQ86UW1 340 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms