RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 TDRD3Q9H7E2 651 aaKnown RBP9.66□□□□□ -0.86
COPS4-201ENST00000264389 FAM217BQ9NTX9 383 aaPredicted RBP9.66□□□□□ -0.86
COPS4-201ENST00000264389 TCP11L1Q9NUJ3 509 aa9.66□□□□□ -0.86
COPS4-201ENST00000264389 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
COPS4-201ENST00000264389 FIBPO43427 364 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 PRPF40AO75400 957 aaKnown RBP9.65□□□□□ -0.86
COPS4-201ENST00000264389 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
COPS4-201ENST00000264389 KRT85P78386 507 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 GUCY1B3Q02153 619 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 CXCL9Q07325 125 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 RESTQ13127 1097 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 TNIP1Q15025 636 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 CSPP1Q1MSJ5 1256 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 RCSD1Q6JBY9 416 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 NEDD1Q8NHV4 660 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 WASF1Q92558 559 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 ALG1Q9BT22 464 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 IL17RBQ9NRM6 502 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 LMBRD1Q9NUN5 540 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 STX8Q9UNK0 236 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 ATRNL1Q5VV63 1379 aa9.65□□□□□ -0.86
COPS4-201ENST00000264389 BAZ2BQ9UIF8 2168 aaKnown RBP9.65□□□□□ -0.86
COPS4-201ENST00000264389 ENTPD3O75355 529 aa9.65□□□□□ -0.87
COPS4-201ENST00000264389 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.87
COPS4-201ENST00000264389 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.87
COPS4-201ENST00000264389 TROAPQ12815 778 aa9.65□□□□□ -0.87
COPS4-201ENST00000264389 TRIM29Q14134 588 aa9.65□□□□□ -0.87
COPS4-201ENST00000264389 REM2Q8IYK8 340 aaPredicted RBP9.65□□□□□ -0.87
COPS4-201ENST00000264389 PNMA1Q8ND90 353 aa9.65□□□□□ -0.87
COPS4-201ENST00000264389 PRMT6Q96LA8 375 aaPredicted RBP9.65□□□□□ -0.87
COPS4-201ENST00000264389 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.87
COPS4-201ENST00000264389 DDX49Q9Y6V7 483 aaKnown RBP9.65□□□□□ -0.87
COPS4-201ENST00000264389 CLRN2A0PK11 232 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
COPS4-201ENST00000264389 MYO1BO43795 1136 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 DEXIO95424 95 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 AKR1B1P15121 316 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 KIF5BP33176 963 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 SHMT1P34896 483 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 AKAP17AQ02040 695 aaKnown RBP9.64□□□□□ -0.87
COPS4-201ENST00000264389 TMTC3Q6ZXV5 915 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 ZFPM1Q8IX07 1006 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 TMEM87AQ8NBN3 555 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 ANKS1AQ92625 1134 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 AIFM3Q96NN9 605 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 RNF26Q9BY78 433 aaPredicted RBP9.64□□□□□ -0.87
COPS4-201ENST00000264389 FHDC1Q9C0D6 1143 aaPredicted RBP9.64□□□□□ -0.87
COPS4-201ENST00000264389 PI4KBQ9UBF8 816 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 TAOK2Q9UL54 1235 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 CLEC11AQ9Y240 323 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 CNTNAP5Q8WYK1 1306 aa9.64□□□□□ -0.87
COPS4-201ENST00000264389 PLEKHA8P1O95397 391 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 MBD3O95983 291 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 RPS12P25398 132 aaKnown RBP9.63□□□□□ -0.87
COPS4-201ENST00000264389 KLHL40Q2TBA0 621 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 CMTR1Q8N1G2 835 aaKnown RBP9.63□□□□□ -0.87
COPS4-201ENST00000264389 CCDC82Q8N4S0 544 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 CEP95Q96GE4 821 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 TMEM47Q9BQJ4 181 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 VEZTQ9HBM0 779 aa9.63□□□□□ -0.87
COPS4-201ENST00000264389 ZNF70Q9UC06 446 aaPredicted RBP9.63□□□□□ -0.87
COPS4-201ENST00000264389 TCP10L2B9ZVM9 353 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 MPHOSPH10O00566 681 aaKnown RBP9.62□□□□□ -0.87
COPS4-201ENST00000264389 TOP1P11387 765 aaKnown RBP9.62□□□□□ -0.87
COPS4-201ENST00000264389 MMP14P50281 582 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 GNL2Q13823 731 aaKnown RBP9.62□□□□□ -0.87
COPS4-201ENST00000264389 GRM4Q14833 912 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 KRT40Q6A162 431 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 FAM173BQ6P4H8 233 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 USP48Q86UV5 1035 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 SPDYE1Q8NFV5 336 aaPredicted RBP9.62□□□□□ -0.87
COPS4-201ENST00000264389 CSRNP1Q96S65 589 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 DNAJC18Q9H819 358 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 DOCK1Q14185 1865 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 FZD9O00144 591 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 XBP1P17861 261 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 GNAQP50148 359 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 CCDC17Q96LX7 622 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 SCAND2PQ9GZW5 306 aaPredicted RBP9.62□□□□□ -0.87
COPS4-201ENST00000264389 GJB4Q9NTQ9 266 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 GJA3Q9Y6H8 435 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 ZNF541Q9H0D2 1346 aa9.62□□□□□ -0.87
COPS4-201ENST00000264389 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
COPS4-201ENST00000264389 IGKV6D-41A0A0C4DH26 115 aa9.61□□□□□ -0.87
COPS4-201ENST00000264389 UBE2Q2LH0YL09 131 aa9.61□□□□□ -0.87
COPS4-201ENST00000264389 PRPF3O43395 683 aaKnown RBP9.61□□□□□ -0.87
COPS4-201ENST00000264389 TTLL1O95922 423 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms