RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 TSPY2A6NKD2 308 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 CCL15Q16663 113 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 CREB3L3Q68CJ9 461 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 KCNH4Q9UQ05 1017 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 A0A1W2PRG0 241 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 HMGCS2P54868 508 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 SNAPC2Q13487 334 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 COL9A3Q14050 684 aaPredicted RBP21.7■■□□□ 1.06
SDF4-201ENST00000263741 NECTIN1Q15223 517 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 C8orf34Q49A92 452 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 CEP95Q96GE4 821 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 FEZ1Q99689 392 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
SDF4-201ENST00000263741 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
SDF4-201ENST00000263741 REC8O95072 547 aa21.69■■□□□ 1.06
SDF4-201ENST00000263741 SEC24BO95487 1268 aa21.69■■□□□ 1.06
SDF4-201ENST00000263741 SIAH1Q8IUQ4 282 aa21.69■■□□□ 1.06
SDF4-201ENST00000263741 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
SDF4-201ENST00000263741 GINM1Q9NU53 330 aa21.69■■□□□ 1.06
SDF4-201ENST00000263741 IGF2BP3O00425 579 aaKnown RBP eCLIP21.68■■□□□ 1.06
SDF4-201ENST00000263741 KDM4AO75164 1064 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 MAP2K2P36507 400 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 GTF2A2P52657 109 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 PTPN18Q99952 460 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 ZKSCAN3Q9BRR0 538 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 WDR18Q9BV38 432 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 MANSC4A6NHS7 340 aaPredicted RBP21.68■■□□□ 1.06
SDF4-201ENST00000263741 E7EWF7 191 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 EEF2P13639 858 aaKnown RBP21.68■■□□□ 1.06
SDF4-201ENST00000263741 GADL1Q6ZQY3 521 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 NEDD1Q8NHV4 660 aa21.68■■□□□ 1.06
SDF4-201ENST00000263741 IGKV6D-41A0A0C4DH26 115 aa21.67■■□□□ 1.06
SDF4-201ENST00000263741 A0A0G2JLL6 359 aaPredicted RBP21.67■■□□□ 1.06
SDF4-201ENST00000263741 MOGSQ13724 837 aa21.67■■□□□ 1.06
SDF4-201ENST00000263741 PRRT2Q7Z6L0 340 aaPredicted RBP21.67■■□□□ 1.06
SDF4-201ENST00000263741 IL17RBQ9NRM6 502 aa21.67■■□□□ 1.06
SDF4-201ENST00000263741 RASEFQ8IZ41 740 aa21.67■■□□□ 1.06
SDF4-201ENST00000263741 PARP14Q460N5 1801 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 USP17L10C9JJH3 530 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 CXCL11O14625 94 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 CETPP11597 493 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 BACE1P56817 501 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 SREBF2Q12772 1141 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 LRRC47Q8N1G4 583 aaKnown RBP21.66■■□□□ 1.06
SDF4-201ENST00000263741 FAM43AQ8N2R8 423 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 ESR2Q92731 530 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 KANSL2Q9H9L4 492 aa21.66■■□□□ 1.06
SDF4-201ENST00000263741 PCP11498 1178 aaKnown RBP21.65■■□□□ 1.06
SDF4-201ENST00000263741 TREML2Q5T2D2 321 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 CYB5R4Q7L1T6 521 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 CHMP4CQ96CF2 233 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 MTMR4Q9NYA4 1195 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 BTBD19C9JJ37 291 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 KIAA1755Q5JYT7 1200 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 CHST3Q7LGC8 479 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 ARHGEF10LQ9HCE6 1279 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 STX8Q9UNK0 236 aa21.65■■□□□ 1.06
SDF4-201ENST00000263741 RAD21O60216 631 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 IFNL1Q8IU54 200 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 USP26Q9BXU7 913 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 TBC1D2Q9BYX2 928 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 EMILIN3Q9NT22 766 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 ZSWIM5Q9P217 1185 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 CLIP2Q9UDT6 1046 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 TESPA1A2RU30 521 aaPredicted RBP21.64■■□□□ 1.05
SDF4-201ENST00000263741 PRKCSHP14314 528 aaPredicted RBP21.64■■□□□ 1.05
SDF4-201ENST00000263741 TM4SF4P48230 202 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 RASGRP2Q7LDG7 609 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 SPICE1Q8N0Z3 855 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 KRT23Q9C075 422 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 TSKSQ9UJT2 592 aa21.64■■□□□ 1.05
SDF4-201ENST00000263741 HSPA4P34932 840 aa21.63■■□□□ 1.05
SDF4-201ENST00000263741 TRDNQ13061 729 aa21.63■■□□□ 1.05
SDF4-201ENST00000263741 GPAT2Q6NUI2 795 aa21.63■■□□□ 1.05
SDF4-201ENST00000263741 RALYLQ86SE5 291 aaKnown RBP21.63■■□□□ 1.05
SDF4-201ENST00000263741 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
SDF4-201ENST00000263741 KIAA1683Q9H0B3 1180 aa21.63■■□□□ 1.05
SDF4-201ENST00000263741 CNNM2Q9H8M5 875 aa21.63■■□□□ 1.05
SDF4-201ENST00000263741 ADCK5Q3MIX3 580 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 RNF20Q5VTR2 975 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 RLFQ13129 1914 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 TTLL1O95922 423 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 SH3D19Q5HYK7 790 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 NCOA7Q8NI08 942 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 TMOD4Q9NZQ9 345 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 MTMR7Q9Y216 660 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 TMX2Q9Y320 296 aa21.62■■□□□ 1.05
SDF4-201ENST00000263741 USP17L2Q6R6M4 530 aa21.61■■□□□ 1.05
SDF4-201ENST00000263741 MB21D2Q8IYB1 491 aaPredicted RBP21.61■■□□□ 1.05
SDF4-201ENST00000263741 NYAP2Q9P242 653 aa21.61■■□□□ 1.05
SDF4-201ENST00000263741 SNX14Q9Y5W7 946 aa21.61■■□□□ 1.05
SDF4-201ENST00000263741 TRPA1O75762 1119 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 VCAM1P19320 739 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 ANTXR2P58335 489 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 RCSD1Q6JBY9 416 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 RNF186Q9NXI6 227 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 COL11A1P12107 1806 aaPredicted RBP21.6■■□□□ 1.05
SDF4-201ENST00000263741 TNKSO95271 1327 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 C19orf81C9J6K1 198 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 PDHXO00330 501 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms