RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 PDE1AP54750 535 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 XKR9Q5GH70 373 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 CCDC186Q7Z3E2 898 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 RSAD2Q8WXG1 361 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 MAGED2Q9UNF1 606 aaPredicted RBP16.49■□□□□ 0.23
CCDC6-201ENST00000263102 LONRF3Q496Y0 759 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 VWA3BQ502W6 1294 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 RAD50Q92878 1312 aa16.49■□□□□ 0.23
CCDC6-201ENST00000263102 VAV2P52735 878 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 HHATQ5VTY9 493 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 I3L4J1 428 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 VPS18Q9P253 973 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 KDRP35968 1356 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 GCNAQ96QF7 691 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 SUDS3Q9H7L9 328 aaPredicted RBP16.48■□□□□ 0.23
CCDC6-201ENST00000263102 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
CCDC6-201ENST00000263102 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
CCDC6-201ENST00000263102 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 CTAGE3PQ8IX95 158 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 MICALL1Q8N3F8 863 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 PPFIBP2Q8ND30 876 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 SYNDIG1Q9H7V2 258 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 TMOD1P28289 359 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 MFSD14BQ5SR56 506 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 ZNF449Q6P9G9 518 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 ANAPC5Q9UJX4 755 aa16.48■□□□□ 0.23
CCDC6-201ENST00000263102 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 RFC1P35251 1148 aaPredicted RBP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 NONOQ15233 471 aaKnown RBP eCLIP16.47■□□□□ 0.239e-7■□□□□ 9.6
CCDC6-201ENST00000263102 F13A1P00488 732 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 RSRC2Q7L4I2 434 aaKnown RBP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 LINS1Q8NG48 757 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 PALM2Q8IXS6 379 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 GDAP1Q8TB36 358 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 CHURC1Q8WUH1 139 aa16.47■□□□□ 0.23
CCDC6-201ENST00000263102 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 ZHX1Q9UKY1 873 aaPredicted RBP16.47■□□□□ 0.23
CCDC6-201ENST00000263102 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 RXRBP28702 533 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 ATP6V1E1P36543 226 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 BANK1Q8NDB2 785 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 ANGPTL3Q9Y5C1 460 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 A0A1B0GVL5 298 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 CSGALNACT2Q8N6G5 542 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 PPP4R1Q8TF05 950 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 ARHGEF2Q92974 986 aaKnown RBP16.46■□□□□ 0.23
CCDC6-201ENST00000263102 RILPQ96NA2 401 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 PLEKHA4Q9H4M7 779 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 PAXBP1Q9Y5B6 917 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 KIF3CO14782 793 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 BCRP11274 1271 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 POLGP54098 1239 aaPredicted RBP16.46■□□□□ 0.23
CCDC6-201ENST00000263102 HS1BP3Q53T59 392 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 METTL23Q86XA0 190 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 LRRIQ4A6NIV6 560 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 PFDN6O15212 129 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 DEXIO95424 95 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 JADE1Q6IE81 842 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 CEP128Q6ZU80 1094 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 HDAC11Q96DB2 347 aa16.46■□□□□ 0.23
CCDC6-201ENST00000263102 TXNDC9O14530 226 aa16.46■□□□□ 0.22
CCDC6-201ENST00000263102 A1BGP04217 495 aa16.46■□□□□ 0.22
CCDC6-201ENST00000263102 DHX32Q7L7V1 743 aaKnown RBP16.46■□□□□ 0.22
CCDC6-201ENST00000263102 CCNA1P78396 465 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 SLC12A1Q13621 1099 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 GBP7Q8N8V2 638 aaPredicted RBP16.45■□□□□ 0.22
CCDC6-201ENST00000263102 MCUQ8NE86 351 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 KLHDC4Q8TBB5 520 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 ALKBH8Q96BT7 664 aaKnown RBP16.45■□□□□ 0.22
CCDC6-201ENST00000263102 HESX1Q9UBX0 185 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 TRIM37O94972 964 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 KLHL7Q8IXQ5 586 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 CCDC105Q8IYK2 499 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 N4BP2L2Q92802 583 aaPredicted RBP16.45■□□□□ 0.22
CCDC6-201ENST00000263102 KRT15P19012 456 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 PRR16Q569H4 304 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 LRRC47Q8N1G4 583 aaKnown RBP16.45■□□□□ 0.22
CCDC6-201ENST00000263102 MIPOL1Q8TD10 442 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 K7ENM7 598 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 LGSNQ5TDP6 509 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 CAPN12Q6ZSI9 719 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 SMYD2Q9NRG4 433 aa16.45■□□□□ 0.22
CCDC6-201ENST00000263102 DLATP10515 647 aaKnown RBP16.44■□□□□ 0.22
CCDC6-201ENST00000263102 TTC38Q5R3I4 469 aa16.44■□□□□ 0.22
CCDC6-201ENST00000263102 MTRQ99707 1265 aa16.44■□□□□ 0.22
CCDC6-201ENST00000263102 ACTN4O43707 911 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms