RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SAMD1Q6SPF0 538 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-202ENST00000262396 NBPF3Q9H094 633 aa14.79□□□□□ -0.04
TRAF4-202ENST00000262396 PAK6Q9NQU5 681 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-202ENST00000262396 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
TRAF4-202ENST00000262396 PHIPQ8WWQ0 1821 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 ATAD5Q96QE3 1844 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 PEX10O60683 326 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 PRKAR2AP13861 404 aaKnown RBP14.78□□□□□ -0.04
TRAF4-202ENST00000262396 PLCD1P51178 756 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 MFSD14CQ5VZR4 134 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 GPR142Q7Z601 462 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 ANKLE1Q8NAG6 615 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRAF4-202ENST00000262396 SDR42E1Q8WUS8 393 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 TANGO6Q9C0B7 1094 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 PAG1Q9NWQ8 432 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 RBPJLQ9UBG7 517 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 GJD2Q9UKL4 321 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 MKI67P46013 3256 aaKnown RBP14.78□□□□□ -0.04
TRAF4-202ENST00000262396 PTPRFP10586 1907 aa14.78□□□□□ -0.04
TRAF4-202ENST00000262396 XRCC5P13010 732 aaKnown RBP14.77□□□□□ -0.05
TRAF4-202ENST00000262396 VCAM1P19320 739 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 FXR1P51114 621 aaKnown RBP eCLIP14.77□□□□□ -0.05
TRAF4-202ENST00000262396 ATP2B2Q01814 1243 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 TRIM32Q13049 653 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 SEPT2Q15019 361 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 Q3C1V9 767 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 ZSCAN25Q6NSZ9 544 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 C7orf61Q8IZ16 206 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 ACER1Q8TDN7 264 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 TRIB2Q92519 343 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 RIOK1Q9BRS2 568 aaKnown RBP14.77□□□□□ -0.05
TRAF4-202ENST00000262396 KIAA1683Q9H0B3 1180 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 C11orf49Q9H6J7 331 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-202ENST00000262396 SH2D4AQ9H788 454 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 ARMT1Q9H993 441 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 ARHGEF10LQ9HCE6 1279 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 SWAP70Q9UH65 585 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 LOC285556D6RIA3 1793 aa14.77□□□□□ -0.05
TRAF4-202ENST00000262396 BRCA2P51587 3418 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 RAD21O60216 631 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 MBD4O95243 580 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 CNGA1P29973 690 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 CATSPERGQ6ZRH7 1159 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 LCORLQ8N3X6 602 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 EDC3Q96F86 508 aaKnown RBP14.76□□□□□ -0.05
TRAF4-202ENST00000262396 GPATCH3Q96I76 525 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 C12orf42Q96LP6 360 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 APBA2Q99767 749 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 LRRCC1Q9C099 1032 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 CRISPLD2Q9H0B8 497 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 PORCNQ9H237 461 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 ZBTB40Q9NUA8 1239 aa14.76□□□□□ -0.05
TRAF4-202ENST00000262396 RBM27Q9P2N5 1060 aaKnown RBP14.76□□□□□ -0.05
TRAF4-202ENST00000262396 SHMT1P34896 483 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 MAP2K5Q13163 448 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 PLS1Q14651 629 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 UBE2Q1Q7Z7E8 422 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 DPP9Q86TI2 863 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 DIS3LQ8TF46 1054 aaKnown RBP14.75□□□□□ -0.05
TRAF4-202ENST00000262396 HOXC10Q9NYD6 342 aa14.75□□□□□ -0.05
TRAF4-202ENST00000262396 ATP5JP18859 108 aa14.74□□□□□ -0.05
TRAF4-202ENST00000262396 COG2Q14746 738 aa14.74□□□□□ -0.05
TRAF4-202ENST00000262396 DCP1AQ9NPI6 582 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-202ENST00000262396 ATP8A2Q9NTI2 1148 aa14.74□□□□□ -0.05
TRAF4-202ENST00000262396 SLC5A4Q9NY91 659 aa14.74□□□□□ -0.05
TRAF4-202ENST00000262396 ZMYND8Q9ULU4 1186 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-202ENST00000262396 MYH1P12882 1939 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 SLC15A5A6NIM6 579 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 CYP2D6P10635 497 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 ADD2P35612 726 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 ICA1Q05084 483 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 CACNB2Q08289 660 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-202ENST00000262396 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-202ENST00000262396 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 SLC4A4Q9Y6R1 1079 aa14.73□□□□□ -0.05
TRAF4-202ENST00000262396 FLOT1O75955 427 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-202ENST00000262396 PTPREP23469 700 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 CCL14Q16627 93 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 MORN1Q5T089 497 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 SLC44A5Q8NCS7 719 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 DYNLL2Q96FJ2 89 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 CCDC17Q96LX7 622 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 HAUS7Q99871 368 aa14.72□□□□□ -0.05
TRAF4-202ENST00000262396 SIPA1L1O43166 1804 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 TCRBV5S4A2TA0A5A2 114 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 SPDYE16A6NNV3 312 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-202ENST00000262396 PRKAB2O43741 272 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-202ENST00000262396 CCND3P30281 292 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-202ENST00000262396 GABPAQ06546 454 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 NCAPG2Q86XI2 1143 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 SIRT2Q8IXJ6 389 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 SPICE1Q8N0Z3 855 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 LPAR1Q92633 364 aa14.71□□□□□ -0.05
TRAF4-202ENST00000262396 OGDHLQ9ULD0 1010 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms