RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 EARS2Q5JPH6 523 aaKnown RBP18.02■□□□□ 0.48
LMNB1-201ENST00000261366 SPATA1Q5VX52 437 aa18.02■□□□□ 0.48
LMNB1-201ENST00000261366 WNT7AO00755 349 aa18.02■□□□□ 0.48
LMNB1-201ENST00000261366 MBD4O95243 580 aa18.02■□□□□ 0.48
LMNB1-201ENST00000261366 CHP1Q99653 195 aa18.02■□□□□ 0.48
LMNB1-201ENST00000261366 PSD3Q9NYI0 1048 aa18.02■□□□□ 0.48
LMNB1-201ENST00000261366 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 RAB21Q9UL25 225 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 SMIM22K7EJ46 135 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 MRPS25P82663 173 aaKnown RBP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 ZNF174Q15697 407 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 GPIHBP1Q8IV16 184 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 MSANTD4Q8NCY6 345 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 GREM2Q9H772 168 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 EPB41L4AQ9HCS5 686 aaPredicted RBP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 EIF3CLB5ME19 914 aaKnown RBP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 RNF40O75150 1001 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 NT5DC1Q5TFE4 455 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 LRRC31Q6UY01 552 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 MAGEB6Q8N7X4 407 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 HNRNPLLQ8WVV9 542 aaKnown RBP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 PAGE5Q96GU1 130 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 EIF3CQ99613 913 aaKnown RBP18.01■□□□□ 0.47
LMNB1-201ENST00000261366 MYO6Q9UM54 1294 aa18.01■□□□□ 0.47
LMNB1-201ENST00000261366 COL18A1P39060 1754 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 ARFGEF2Q9Y6D5 1785 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 SIPA1L3O60292 1781 aaPredicted RBP18■□□□□ 0.47
LMNB1-201ENST00000261366 KRT9P35527 623 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 EVA1CP58658 441 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 RRAGBQ5VZM2 374 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 PPP1R3FQ6ZSY5 799 aaPredicted RBP18■□□□□ 0.47
LMNB1-201ENST00000261366 PACS2Q86VP3 889 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 GOLGA6L1Q8N7Z2 621 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 MIGA1Q8NAN2 632 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 IVLP07476 585 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 TDO2P48775 406 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 KRT31Q15323 416 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 FKBP15Q5T1M5 1219 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
LMNB1-201ENST00000261366 SRPRBQ9Y5M8 271 aaKnown RBP18■□□□□ 0.47
LMNB1-201ENST00000261366 POTEB2H3BUK9 544 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 ITGA6P23229 1130 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 ERCC5P28715 1186 aaPredicted RBP17.99■□□□□ 0.47
LMNB1-201ENST00000261366 USP5P45974 858 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 WTAPQ15007 396 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 MFSD6Q6ZSS7 791 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 CNGA4Q8IV77 575 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 IFNL3Q8IZI9 196 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 KDM4FA0A1W2PPD8 638 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 IFNAR1P17181 557 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 STRBPQ96SI9 672 aaKnown RBP17.99■□□□□ 0.47
LMNB1-201ENST00000261366 ABHD10Q9NUJ1 306 aa17.99■□□□□ 0.47
LMNB1-201ENST00000261366 ARHGAP25P42331 645 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 CUL4BQ13620 913 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
LMNB1-201ENST00000261366 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 TRIML1Q8N9V2 468 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 WASF1Q92558 559 aa17.98■□□□□ 0.47
LMNB1-201ENST00000261366 NAA15Q9BXJ9 866 aaKnown RBP17.98■□□□□ 0.47
LMNB1-201ENST00000261366 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
LMNB1-201ENST00000261366 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 MINDY4BA8MYZ0 360 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 MMS19Q96T76 1030 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 PPP1R3GB7ZBB8 358 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 TTC31Q49AM3 519 aaPredicted RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 TTC19Q6DKK2 380 aaPredicted RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 KANK3Q6NY19 840 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 FAM71BQ8TC56 605 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 IQSEC3Q9UPP2 1182 aaPredicted RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 BAZ2BQ9UIF8 2168 aaKnown RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 PCDH11XQ9BZA7 1347 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 PCDH11YQ9BZA8 1340 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 ERICH2A1L162 156 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 ATP1A1P05023 1023 aaKnown RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 IL2RBP14784 551 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 PBX1P40424 430 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 UBXN1Q04323 297 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 CRACR2BQ8N4Y2 399 aaPredicted RBP17.97■□□□□ 0.47
LMNB1-201ENST00000261366 DRC1Q96MC2 740 aa17.97■□□□□ 0.47
LMNB1-201ENST00000261366 PLEKHG2Q9H7P9 1386 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 GTF2A1P52655 376 aaPredicted RBP17.96■□□□□ 0.47
LMNB1-201ENST00000261366 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 FOXP1Q9H334 677 aaPredicted RBP17.96■□□□□ 0.47
LMNB1-201ENST00000261366 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 WHAMMP3Q1A5X7 153 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 DNAJC21Q5F1R6 531 aaKnown RBP17.96■□□□□ 0.47
LMNB1-201ENST00000261366 AKNAD1Q5T1N1 836 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms