RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 CCDC178Q5BJE1 867 aa18.32■□□□□ 0.52
GYPC-201ENST00000259254 SNX21Q969T3 373 aa18.32■□□□□ 0.52
GYPC-201ENST00000259254 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
GYPC-201ENST00000259254 ANGEL1Q9UNK9 670 aaKnown RBP18.32■□□□□ 0.52
GYPC-201ENST00000259254 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
GYPC-201ENST00000259254 NMT2O60551 498 aa18.31■□□□□ 0.52
GYPC-201ENST00000259254 TOB2Q14106 344 aaPredicted RBP18.31■□□□□ 0.52
GYPC-201ENST00000259254 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
GYPC-201ENST00000259254 GBA2Q9HCG7 927 aaPredicted RBP18.31■□□□□ 0.52
GYPC-201ENST00000259254 PAPPA2Q9BXP8 1791 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 GH2P01242 217 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 CTCFP49711 727 aaPredicted RBP18.3■□□□□ 0.52
GYPC-201ENST00000259254 HUNKP57058 714 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 MAP3K10Q02779 954 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 APOBRQ0VD83 1088 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 IFIT1BQ5T764 474 aaKnown RBP18.3■□□□□ 0.52
GYPC-201ENST00000259254 TMEM179Q6ZVK1 233 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 ENAHQ8N8S7 591 aaPredicted RBP18.3■□□□□ 0.52
GYPC-201ENST00000259254 IGDCC4Q8TDY8 1250 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 TBC1D2Q9BYX2 928 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 LY9Q9HBG7 655 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
GYPC-201ENST00000259254 STX8Q9UNK0 236 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 LIMCH1Q9UPQ0 1083 aa18.3■□□□□ 0.52
GYPC-201ENST00000259254 KLF18A0A0U1RQI7 1052 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
GYPC-201ENST00000259254 MAP2K2P36507 400 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
GYPC-201ENST00000259254 RRP1BQ14684 758 aaKnown RBP18.29■□□□□ 0.52
GYPC-201ENST00000259254 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 SYNE3Q6ZMZ3 975 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 TMTC2Q8N394 836 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 CEP95Q96GE4 821 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 WRNIP1Q96S55 665 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 PLIN4Q96Q06 1357 aa18.29■□□□□ 0.52
GYPC-201ENST00000259254 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
GYPC-201ENST00000259254 AOC2O75106 756 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 CAP2P40123 477 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 LIFRP42702 1097 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 SEPT2Q15019 361 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 SEC23AQ15436 765 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 SHROOM1Q2M3G4 852 aaPredicted RBP18.28■□□□□ 0.52
GYPC-201ENST00000259254 PPP4R3BQ5MIZ7 849 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 DGKHQ86XP1 1220 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 CLEC10AQ8IUN9 316 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
GYPC-201ENST00000259254 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.28■□□□□ 0.52
GYPC-201ENST00000259254 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 ZBTB21Q9ULJ3 1066 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 TPCN1Q9ULQ1 816 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 FZD1Q9UP38 647 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 SLC12A7Q9Y666 1083 aa18.28■□□□□ 0.52
GYPC-201ENST00000259254 SSC5DA1L4H1 1573 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 GOLGA8BA8MQT2 603 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 JAG1P78504 1218 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 STK3Q13188 491 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 FBXL16Q8N461 479 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.27■□□□□ 0.52
GYPC-201ENST00000259254 BRPF3Q9ULD4 1205 aa18.27■□□□□ 0.52
GYPC-201ENST00000259254 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 IGKV6D-41A0A0C4DH26 115 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 PHF20L1A8MW92 1017 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 CTNND1O60716 968 aaKnown RBP18.26■□□□□ 0.51
GYPC-201ENST00000259254 INPP5BP32019 993 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 IREB2P48200 963 aaKnown RBP18.26■□□□□ 0.51
GYPC-201ENST00000259254 ICA1Q05084 483 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 RGMBQ6NW40 437 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 CATIPQ7Z7H3 387 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 TNS4Q8IZW8 715 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
GYPC-201ENST00000259254 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
GYPC-201ENST00000259254 TTLL1O95922 423 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 HSP90AA1P07900 732 aaKnown RBP18.25■□□□□ 0.51
GYPC-201ENST00000259254 ASNSP08243 561 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
GYPC-201ENST00000259254 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
GYPC-201ENST00000259254 NOGQ13253 232 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 RCSD1Q6JBY9 416 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 SGMS1Q86VZ5 419 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 MYL10Q9BUA6 226 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
GYPC-201ENST00000259254 PICK1Q9NRD5 415 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 SH2B1Q9NRF2 756 aaPredicted RBP18.25■□□□□ 0.51
GYPC-201ENST00000259254 ZNF112Q9UJU3 913 aa18.25■□□□□ 0.51
GYPC-201ENST00000259254 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms