RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 KCNQ5Q9NR82 932 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 KBTBD4Q9NVX7 518 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.44□□□□□ -1.06
TRA2B-201ENST00000259043 RBAK-RBAKDNI3L0D1 243 aa8.44□□□□□ -1.06
TRA2B-201ENST00000259043 PGRP06401 933 aa8.44□□□□□ -1.06
TRA2B-201ENST00000259043 NKPD1Q17RQ9 610 aa8.44□□□□□ -1.06
TRA2B-201ENST00000259043 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
TRA2B-201ENST00000259043 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
TRA2B-201ENST00000259043 MAPK8IP1Q9UQF2 711 aa8.44□□□□□ -1.06
TRA2B-201ENST00000259043 CORINQ9Y5Q5 1042 aa8.44□□□□□ -1.06
TRA2B-201ENST00000259043 ZNF865P0CJ78 1059 aaPredicted RBP8.43□□□□□ -1.06
TRA2B-201ENST00000259043 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 TRIM26Q12899 539 aaPredicted RBP8.43□□□□□ -1.06
TRA2B-201ENST00000259043 C22orf34Q6ZV56 151 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 ANKLE2Q86XL3 938 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 C1QL4Q86Z23 238 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 MCATQ8IVS2 390 aaKnown RBP8.43□□□□□ -1.06
TRA2B-201ENST00000259043 LRRC56Q8IYG6 542 aaPredicted RBP8.43□□□□□ -1.06
TRA2B-201ENST00000259043 TMEM87BQ96K49 555 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 MIPEPQ99797 713 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
TRA2B-201ENST00000259043 LMCD1Q9NZU5 365 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 PRR36Q9H6K5 1346 aa8.43□□□□□ -1.06
TRA2B-201ENST00000259043 RBM47A0AV96 593 aaKnown RBP8.42□□□□□ -1.06
TRA2B-201ENST00000259043 MINDY4BA8MYZ0 360 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 GLI1P08151 1106 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 CLCN7P51798 805 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 PDE4BQ07343 736 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 FYB2Q5VWT5 728 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 LETMD1Q6P1Q0 360 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 GOLM1Q8NBJ4 401 aa8.42□□□□□ -1.06
TRA2B-201ENST00000259043 DPH2Q9BQC3 489 aaPredicted RBP8.42□□□□□ -1.06
TRA2B-201ENST00000259043 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
TRA2B-201ENST00000259043 PITPNM2Q9BZ72 1349 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 GNAT3A8MTJ3 354 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 PRR33A8MZF0 331 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 GREM1O60565 184 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 TMEM201Q5SNT2 666 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 FBXL19Q6PCT2 694 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 SYDE1Q6ZW31 735 aaPredicted RBP8.41□□□□□ -1.06
TRA2B-201ENST00000259043 FBXO27Q8NI29 283 aa8.41□□□□□ -1.06
TRA2B-201ENST00000259043 BPNT1O95861 308 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 MPP2Q14168 576 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 LILRA6Q6PI73 481 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 MPZL3Q6UWV2 235 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 LCNL1Q6ZST4 164 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 XAGE3Q8WTP9 111 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 KIRREL1Q96J84 757 aa8.4□□□□□ -1.06
TRA2B-201ENST00000259043 UNC13AQ9UPW8 1703 aa8.4□□□□□ -1.07
TRA2B-201ENST00000259043 SNAP47Q5SQN1 464 aa8.39□□□□□ -1.07
TRA2B-201ENST00000259043 PRR23BQ6ZRT6 265 aa8.39□□□□□ -1.07
TRA2B-201ENST00000259043 REC114Q7Z4M0 266 aa8.39□□□□□ -1.07
TRA2B-201ENST00000259043 DNAJB8Q8NHS0 232 aa8.39□□□□□ -1.07
TRA2B-201ENST00000259043 LRRC3Q9BY71 257 aa8.39□□□□□ -1.07
TRA2B-201ENST00000259043 NACADO15069 1562 aa8.39□□□□□ -1.07
TRA2B-201ENST00000259043 UPK3BL1B0FP48 263 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 UPK3BL2E5RIL1 263 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 ZSCAN22P10073 491 aaPredicted RBP8.38□□□□□ -1.07
TRA2B-201ENST00000259043 PLCG1P19174 1290 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
TRA2B-201ENST00000259043 TMEM67Q5HYA8 995 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 SFRP5Q5T4F7 317 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 PPP1R13LQ8WUF5 828 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 ADAMTS1Q9UHI8 967 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
TRA2B-201ENST00000259043 CAPN6Q9Y6Q1 641 aa8.38□□□□□ -1.07
TRA2B-201ENST00000259043 CDH24Q86UP0 819 aa8.37□□□□□ -1.07
TRA2B-201ENST00000259043 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
TRA2B-201ENST00000259043 REV1Q9UBZ9 1251 aa8.37□□□□□ -1.07
TRA2B-201ENST00000259043 ROBO2Q9HCK4 1378 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 BICRAQ9NZM4 1560 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 NFIBO00712 420 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 GRIN3BO60391 1043 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 DNAJA2O60884 412 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 HTR3BO95264 441 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 C1QTNF9P0C862 333 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 CRKP46108 304 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 DIEXFQ68CQ4 756 aaKnown RBP8.36□□□□□ -1.07
TRA2B-201ENST00000259043 ZNF746Q6NUN9 644 aaPredicted RBP8.36□□□□□ -1.07
TRA2B-201ENST00000259043 SLFN12Q8IYM2 578 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 TMEM87AQ8NBN3 555 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 ZNF296Q8WUU4 475 aaPredicted RBP8.36□□□□□ -1.07
TRA2B-201ENST00000259043 CARS2Q9HA77 564 aaKnown RBP8.36□□□□□ -1.07
TRA2B-201ENST00000259043 SEMA3GQ9NS98 782 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 SUPT16HQ9Y5B9 1047 aaKnown RBP8.36□□□□□ -1.07
TRA2B-201ENST00000259043 ST14Q9Y5Y6 855 aa8.36□□□□□ -1.07
TRA2B-201ENST00000259043 KRT1P04264 644 aa8.35□□□□□ -1.07
TRA2B-201ENST00000259043 GDNFP39905 211 aa8.35□□□□□ -1.07
TRA2B-201ENST00000259043 FANCCQ00597 558 aa8.35□□□□□ -1.07
TRA2B-201ENST00000259043 LCE5AQ5TCM9 118 aa8.35□□□□□ -1.07
TRA2B-201ENST00000259043 MFSD4AQ8N468 514 aa8.35□□□□□ -1.07
TRA2B-201ENST00000259043 FBXO15Q8NCQ5 510 aaPredicted RBP8.35□□□□□ -1.07
TRA2B-201ENST00000259043 CYB5D2Q8WUJ1 264 aa8.35□□□□□ -1.07
TRA2B-201ENST00000259043 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms