RNA–Protein interactions for RNA: ENST00000258704.3

SPDYE1-201, Transcript of speedy/RINGO cell cycle regulator family member E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE1, Length 2,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE1-201ENST00000258704 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 FOXN1O15353 648 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 PRPF3O43395 683 aaKnown RBP13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 CUTAO60888 179 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 TFAP4Q01664 338 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 PDE4BQ07343 736 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 MAPKAPK5Q8IW41 473 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 KRI1Q8N9T8 703 aaKnown RBP13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 C16orf45Q96MC5 204 aaPredicted RBP13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 IL17RBQ9NRM6 502 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 KCNH3Q9ULD8 1083 aa13.45□□□□□ -0.26
SPDYE1-201ENST00000258704 WNT7AO00755 349 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 PLCD1P51178 756 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 USP49Q70CQ1 688 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 FOXP4Q8IVH2 680 aaPredicted RBP13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 MYH6P13533 1939 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 ADAMTS3O15072 1205 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 NEMFO60524 1076 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 PHF20Q9BVI0 1012 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 GGA1Q9UJY5 639 aa13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 FBXO2Q9UK22 296 aaPredicted RBP13.44□□□□□ -0.26
SPDYE1-201ENST00000258704 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 POLRMTO00411 1230 aaKnown RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 DDAH1O94760 285 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 ARID5BQ14865 1188 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 TPD52L1Q16890 204 aaPredicted RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 OLFM4Q6UX06 510 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 METTL16Q86W50 562 aaKnown RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 TNNT1P13805 278 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 PTPREP23469 700 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 NPY5RQ15761 445 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 TXNRD1Q16881 649 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 CTCFLQ8NI51 663 aaPredicted RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 TBC1D16Q8TBP0 767 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 TIGD1Q96MW7 591 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 MTMR7Q9Y216 660 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 CNTNAP5Q8WYK1 1306 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 C6orf229H3BNL8 230 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 CALM1P0DP23 149 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 CALM2P0DP24 149 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 CALM3P0DP25 149 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 NLRP12P59046 1061 aa13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 RBM6P78332 1123 aaKnown RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
SPDYE1-201ENST00000258704 BAG3O95817 575 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 BTDP43251 543 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 PPP4CP60510 307 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 KRBA2Q6ZNG9 492 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 FILIP1Q7Z7B0 1213 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 PDILTQ8N807 584 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 CNNM3Q8NE01 707 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 BBOX1O75936 387 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 XBP1P17861 261 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 KRT2P35908 639 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
SPDYE1-201ENST00000258704 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 POLR2DO15514 142 aaKnown RBP13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 IL1R1P14778 569 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 GSTO1P78417 241 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 NCAPHQ15003 741 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 GRAMD1CQ8IYS0 662 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 CSRNP2Q9H175 543 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 PCDHA5Q9Y5H7 936 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 KIAA1551Q9HCM1 1747 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 ZBTB22O15209 634 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 SKILP12757 684 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 ZNF174Q15697 407 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 KAT14Q9H8E8 782 aa13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 SRPRBQ9Y5M8 271 aaKnown RBP13.41□□□□□ -0.26
SPDYE1-201ENST00000258704 TRIM75PA6NK02 468 aa13.4□□□□□ -0.26
SPDYE1-201ENST00000258704 LDHCP07864 332 aa13.4□□□□□ -0.26
SPDYE1-201ENST00000258704 BMP6P22004 513 aa13.4□□□□□ -0.26
SPDYE1-201ENST00000258704 MDM2Q00987 491 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms