RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CYB5R4Q7L1T6 521 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 GPATCH11Q8N954 259 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 GSDMAQ96QA5 445 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 PUS7LQ9H0K6 701 aaKnown RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 A6NNZ2 444 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 STX17P56962 302 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 SPAG1Q07617 926 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 TUBB8Q3ZCM7 444 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 NFXL1Q6ZNB6 911 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 SGMS1Q86VZ5 419 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 DIS3L2Q8IYB7 885 aaKnown RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 SLF1Q9BQI6 1058 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 SLC26A6Q9BXS9 759 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 KAT14Q9H8E8 782 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 MST1RQ04912 1400 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 MYH7P12883 1935 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 LIG3P49916 1009 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 LRRC24Q50LG9 513 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 PAPD7Q5XG87 772 aaKnown RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 EHBP1Q8NDI1 1231 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 SEC31BQ9NQW1 1179 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 CEP126Q9P2H0 1117 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 EPN1Q9Y6I3 576 aaPredicted RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 N4BP3O15049 544 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 NDUFA10O95299 355 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 MNAT1P51948 309 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 IQCEQ6IPM2 695 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 RPAINQ86UA6 219 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 RIN2Q8WYP3 895 aaPredicted RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
TROAP-201ENST00000257909 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 CAPS2Q9BXY5 557 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 GUCA1BQ9UMX6 200 aa12.97□□□□□ -0.33
TROAP-201ENST00000257909 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
TROAP-201ENST00000257909 AGPSO00116 658 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 GLI3P10071 1580 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 IFNAR1P17181 557 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
TROAP-201ENST00000257909 KRT9P35527 623 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 CCDC70Q6NSX1 233 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 CCNI2Q6ZMN8 369 aaPredicted RBP12.96□□□□□ -0.33
TROAP-201ENST00000257909 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 KAT2BQ92831 832 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■■□□ 16.7
TROAP-201ENST00000257909 CSRNP2Q9H175 543 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
TROAP-201ENST00000257909 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
TROAP-201ENST00000257909 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
TROAP-201ENST00000257909 CCDC196A0A1B0GTZ2 297 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 EIF3HO15372 352 aaKnown RBP eCLIP12.96□□□□□ -0.34
TROAP-201ENST00000257909 INPP5BP32019 993 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 MAP2K2P36507 400 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 LIFRP42702 1097 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 KRT31Q15323 416 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 SKIDA1Q1XH10 827 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 TRIM22Q8IYM9 498 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 RUBCNQ92622 972 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 CXorf56Q9H5V9 222 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 STRN4Q9NRL3 753 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 PCDHB6Q9Y5E3 794 aa12.96□□□□□ -0.34
TROAP-201ENST00000257909 GOLGA8KD6RF30 607 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 CCT6AP40227 531 aaKnown RBP12.95□□□□□ -0.34
TROAP-201ENST00000257909 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
TROAP-201ENST00000257909 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
TROAP-201ENST00000257909 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 SLC12A7Q9Y666 1083 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 GCP02774 474 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 DPYDQ12882 1025 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 TMEM67Q5HYA8 995 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 CNPY4Q8N129 248 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 PAGE5Q96GU1 130 aa12.95□□□□□ -0.34
TROAP-201ENST00000257909 B4E1Z4 1266 aa12.94□□□□□ -0.34
TROAP-201ENST00000257909 ENC1O14682 589 aa12.94□□□□□ -0.34
TROAP-201ENST00000257909 OPA1O60313 960 aa12.94□□□□□ -0.34
TROAP-201ENST00000257909 ATP1A1P05023 1023 aaKnown RBP12.94□□□□□ -0.34
TROAP-201ENST00000257909 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms