RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 SREK1Q8WXA9 508 aaKnown RBP18.9■□□□□ 0.62
SORT1-201ENST00000256637 KIFAP3Q92845 792 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.9■□□□□ 0.629e-8■□□□□ 10.8
SORT1-201ENST00000256637 GNG11P61952 73 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 CASC4Q6P4E1 433 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 CAPN9O14815 690 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 POLR2DO15514 142 aaKnown RBP18.9■□□□□ 0.62
SORT1-201ENST00000256637 RLBP1P12271 317 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 TAB3Q8N5C8 712 aaPredicted RBP18.9■□□□□ 0.62
SORT1-201ENST00000256637 GUCA1BQ9UMX6 200 aa18.9■□□□□ 0.62
SORT1-201ENST00000256637 PLEKHA4Q9H4M7 779 aa18.89■□□□□ 0.62
SORT1-201ENST00000256637 SASH1O94885 1247 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 CCDC175P0C221 793 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 TNFAIP3P21580 790 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 NOC4LQ9BVI4 516 aaKnown RBP18.89■□□□□ 0.61
SORT1-201ENST00000256637 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.61
SORT1-201ENST00000256637 MLH3Q9UHC1 1453 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 CHRNA5P30532 468 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 NSMCE1Q8WV22 266 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 PUS3Q9BZE2 481 aaKnown RBP18.89■□□□□ 0.61
SORT1-201ENST00000256637 SUDS3Q9H7L9 328 aaPredicted RBP18.89■□□□□ 0.61
SORT1-201ENST00000256637 EXOC7Q9UPT5 735 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 LIG4P49917 911 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 ZBTB38Q8NAP3 1195 aaPredicted RBP18.89■□□□□ 0.61
SORT1-201ENST00000256637 IFT81Q8WYA0 676 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 DLATP10515 647 aaKnown RBP18.89■□□□□ 0.61
SORT1-201ENST00000256637 HAUS3Q68CZ6 603 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 PSTPIP2Q9H939 334 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 DACT1Q9NYF0 836 aa18.89■□□□□ 0.61
SORT1-201ENST00000256637 SLITRK6Q9H5Y7 841 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 APPBP2Q92624 585 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 BICDL2A1A5D9 508 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 FBXO11Q86XK2 927 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 TICAM2Q86XR7 235 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 PARD3BQ8TEW8 1205 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 PPFIA1Q13136 1202 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
SORT1-201ENST00000256637 MAP9Q49MG5 647 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 CERKQ8TCT0 537 aa18.88■□□□□ 0.61
SORT1-201ENST00000256637 EIF4A1P60842 406 aaKnown RBP18.87■□□□□ 0.61
SORT1-201ENST00000256637 HERC4Q5GLZ8 1057 aaPredicted RBP18.87■□□□□ 0.61
SORT1-201ENST00000256637 FAM204AQ9H8W3 233 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 LZTFL1Q9NQ48 299 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 SPOPO43791 374 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 SLU7O95391 586 aaKnown RBP18.87■□□□□ 0.61
SORT1-201ENST00000256637 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
SORT1-201ENST00000256637 EXOC3O60645 756 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 BMP15O95972 392 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 KSR1Q8IVT5 923 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 PLVAPQ9BX97 442 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 UBE2HP62256 183 aa18.87■□□□□ 0.61
SORT1-201ENST00000256637 USP17L3A6NCW0 530 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 USP17L4A6NCW7 530 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 ZSCAN20P17040 1043 aaPredicted RBP18.86■□□□□ 0.61
SORT1-201ENST00000256637 CYLC1P35663 651 aaPredicted RBP18.86■□□□□ 0.61
SORT1-201ENST00000256637 USP17L1Q7RTZ2 530 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 CEP57Q86XR8 500 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 MAP3K15Q6ZN16 1313 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 RASAL2Q9UJF2 1139 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 COBLO75128 1261 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 CCNA1P78396 465 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 BMP2KLQ5H9B9 411 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 KIF18AQ8NI77 898 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
SORT1-201ENST00000256637 KIF1BO60333 1816 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 CUL4BQ13620 913 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
SORT1-201ENST00000256637 XDHP47989 1333 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 K7ENM7 598 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 CYP4A11Q02928 519 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 TTC38Q5R3I4 469 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 SLFN13Q68D06 897 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 ZNF341Q9BYN7 854 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 PCDHB13Q9Y5F0 798 aa18.86■□□□□ 0.61
SORT1-201ENST00000256637 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
SORT1-201ENST00000256637 KDRP35968 1356 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 DEXIO95424 95 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 RAD50Q92878 1312 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 RPL13P26373 211 aaKnown RBP18.85■□□□□ 0.61
SORT1-201ENST00000256637 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
SORT1-201ENST00000256637 ZWINTO95229 277 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 DCUN1D2Q6PH85 259 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 INPP5FQ9Y2H2 1132 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 SPATA17Q96L03 361 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 TMEM106CQ9BVX2 250 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 KCNK9Q9NPC2 374 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
SORT1-201ENST00000256637 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
SORT1-201ENST00000256637 PROSER3Q2NL68 480 aa18.84■□□□□ 0.61
SORT1-201ENST00000256637 CABP7Q86V35 215 aa18.84■□□□□ 0.61
SORT1-201ENST00000256637 OTUD5Q96G74 571 aa18.84■□□□□ 0.61
SORT1-201ENST00000256637 SF3A3Q12874 501 aaKnown RBP eCLIP18.84■□□□□ 0.61
SORT1-201ENST00000256637 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms