RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 CALM3P0DP25 149 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
NIP7-202ENST00000254941 SHMT1P34896 483 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 NOVP48745 357 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 RTN1Q16799 776 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 FAM83AQ86UY5 434 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
NIP7-202ENST00000254941 ZSCAN29Q8IWY8 852 aaPredicted RBP11.04□□□□□ -0.64
NIP7-202ENST00000254941 CCDC144CPQ8IYA2 1237 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 GJA3Q9Y6H8 435 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 MYH15Q9Y2K3 1946 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 IFNAR1P17181 557 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 MCM4P33991 863 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 NBPF9Q3BBW0 867 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 GPC2Q8N158 579 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 CRACR2BQ8N4Y2 399 aaPredicted RBP11.03□□□□□ -0.64
NIP7-202ENST00000254941 NUP133Q8WUM0 1156 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 CCDC17Q96LX7 622 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
NIP7-202ENST00000254941 DNAJC18Q9H819 358 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 CNOT7Q9UIV1 285 aaKnown RBP11.03□□□□□ -0.64
NIP7-202ENST00000254941 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
NIP7-202ENST00000254941 POLR2AP24928 1970 aaKnown RBP11.03□□□□□ -0.64
NIP7-202ENST00000254941 TCP10L2B9ZVM9 353 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 BAG4O95429 457 aaKnown RBP11.02□□□□□ -0.64
NIP7-202ENST00000254941 F13A1P00488 732 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 FOXD4L5Q5VV16 416 aaPredicted RBP11.02□□□□□ -0.64
NIP7-202ENST00000254941 FOXD4L4Q8WXT5 416 aaPredicted RBP11.02□□□□□ -0.64
NIP7-202ENST00000254941 CEP95Q96GE4 821 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 CSRNP1Q96S65 589 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 MAP3K14Q99558 947 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 KAT14Q9H8E8 782 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 ORC3Q9UBD5 711 aaPredicted RBP11.02□□□□□ -0.64
NIP7-202ENST00000254941 STX8Q9UNK0 236 aa11.02□□□□□ -0.64
NIP7-202ENST00000254941 STK36Q9NRP7 1315 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.65
NIP7-202ENST00000254941 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 PPFIA3O75145 1194 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 EGFRP00533 1210 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 AKR1B1P15121 316 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 NBR1Q14596 966 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 TATDN1Q6P1N9 297 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 CDC37L1Q7L3B6 337 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 PNMA1Q8ND90 353 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.65
NIP7-202ENST00000254941 MTMR4Q9NYA4 1195 aa11.02□□□□□ -0.65
NIP7-202ENST00000254941 HERC5Q9UII4 1024 aaKnown RBP11.02□□□□□ -0.65
NIP7-202ENST00000254941 NBPF11Q86T75 865 aa11.01□□□□□ -0.65
NIP7-202ENST00000254941 PHKBQ93100 1093 aa11.01□□□□□ -0.65
NIP7-202ENST00000254941 TMEM47Q9BQJ4 181 aa11.01□□□□□ -0.65
NIP7-202ENST00000254941 VEZTQ9HBM0 779 aa11.01□□□□□ -0.65
NIP7-202ENST00000254941 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
NIP7-202ENST00000254941 FAM196BA6NMK8 535 aa11□□□□□ -0.65
NIP7-202ENST00000254941 H3BQV1 296 aa11□□□□□ -0.65
NIP7-202ENST00000254941 H7C1D1 291 aa11□□□□□ -0.65
NIP7-202ENST00000254941 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
NIP7-202ENST00000254941 SLURP2P0DP57 97 aa11□□□□□ -0.65
NIP7-202ENST00000254941 TOP1P11387 765 aaKnown RBP11□□□□□ -0.65
NIP7-202ENST00000254941 SSRP1Q08945 709 aaKnown RBP11□□□□□ -0.65
NIP7-202ENST00000254941 CERKLQ49MI3 558 aaPredicted RBP11□□□□□ -0.65
NIP7-202ENST00000254941 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
NIP7-202ENST00000254941 IFFO2Q5TF58 517 aa11□□□□□ -0.65
NIP7-202ENST00000254941 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
NIP7-202ENST00000254941 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
NIP7-202ENST00000254941 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
NIP7-202ENST00000254941 GPRC5DQ9NZD1 345 aa11□□□□□ -0.65
NIP7-202ENST00000254941 PGAP2Q9UHJ9 254 aa11□□□□□ -0.65
NIP7-202ENST00000254941 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
NIP7-202ENST00000254941 KIF5BP33176 963 aa11□□□□□ -0.65
NIP7-202ENST00000254941 TNNI2P48788 182 aa11□□□□□ -0.65
NIP7-202ENST00000254941 FUT2Q10981 343 aa11□□□□□ -0.65
NIP7-202ENST00000254941 TNFAIP1Q13829 316 aa11□□□□□ -0.65
NIP7-202ENST00000254941 KIF4BQ2VIQ3 1234 aa11□□□□□ -0.65
NIP7-202ENST00000254941 TRIM22Q8IYM9 498 aa11□□□□□ -0.65
NIP7-202ENST00000254941 FBXO18Q8NFZ0 1043 aa11□□□□□ -0.65
NIP7-202ENST00000254941 TMEM39BQ9GZU3 492 aa11□□□□□ -0.65
NIP7-202ENST00000254941 RNF181Q9P0P0 153 aa11□□□□□ -0.65
NIP7-202ENST00000254941 ATAD5Q96QE3 1844 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 GOLGA6L22H0YM25 854 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 TBC1D12O60347 775 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 TTLL1O95922 423 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 TBC1D10BQ4KMP7 808 aaPredicted RBP10.99□□□□□ -0.65
NIP7-202ENST00000254941 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
NIP7-202ENST00000254941 C8orf76Q96K31 380 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
NIP7-202ENST00000254941 RNF26Q9BY78 433 aaPredicted RBP10.99□□□□□ -0.65
NIP7-202ENST00000254941 MPHOSPH10O00566 681 aaKnown RBP10.98□□□□□ -0.65
NIP7-202ENST00000254941 PLEKHA8P1O95397 391 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 DEXIO95424 95 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 RASA3Q14644 834 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 GRM4Q14833 912 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 MCTP1Q6DN14 999 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 TMEM179Q6ZVK1 233 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms