RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 DACT2Q5SW24 774 aa13.46□□□□□ -0.26
LIN28A-201ENST00000254231 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.26
LIN28A-201ENST00000254231 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.26
LIN28A-201ENST00000254231 RPAP1Q9BWH6 1393 aaPredicted RBP13.46□□□□□ -0.26
LIN28A-201ENST00000254231 KIF28PB7ZC32 967 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 MOB2Q70IA6 237 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 GAS2L3Q86XJ1 694 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 TRIM75PA6NK02 468 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 IL1R1P14778 569 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 IL17RBQ9NRM6 502 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.45□□□□□ -0.26
LIN28A-201ENST00000254231 PLCG2P16885 1265 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 RHBDL3P58872 404 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
LIN28A-201ENST00000254231 IBSPP21815 317 aaPredicted RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 KCNA3P22001 575 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 EPS15P42566 896 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 ECE1P42892 770 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 STAG1Q8WVM7 1258 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 ZNRF3Q9ULT6 936 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 PTMAP06454 111 aaKnown RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 RASA1P20936 1047 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 SLC1A4P43007 532 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 NAPAP54920 295 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 GPR75-ASB3A0A0A6YYF3 556 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 CDKL5O76039 1030 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 MYCP01106 439 aaPredicted RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 RASA3Q14644 834 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 STRIP1Q5VSL9 837 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 SRBD1Q8N5C6 995 aaKnown RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 FSIP1Q8NA03 581 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 PIGSQ96S52 555 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
LIN28A-201ENST00000254231 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
LIN28A-201ENST00000254231 GPIHBP1Q8IV16 184 aa13.43□□□□□ -0.26
LIN28A-201ENST00000254231 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
LIN28A-201ENST00000254231 SEC63Q9UGP8 760 aaKnown RBP13.43□□□□□ -0.26
LIN28A-201ENST00000254231 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
LIN28A-201ENST00000254231 TNNI2P48788 182 aa13.43□□□□□ -0.26
LIN28A-201ENST00000254231 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
LIN28A-201ENST00000254231 ZKSCAN4Q969J2 545 aaPredicted RBP13.43□□□□□ -0.26
LIN28A-201ENST00000254231 BMP2KQ9NSY1 1161 aaPredicted RBP13.43□□□□□ -0.26
LIN28A-201ENST00000254231 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 NFKBIEO00221 500 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 ZSCAN23Q3MJ62 389 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 CC2D2BQ6DHV5 1058 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 GLIS2Q9BZE0 524 aaPredicted RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 BAZ2AQ9UIF9 1905 aaKnown RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 ICA1Q05084 483 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 LETM2Q2VYF4 491 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 OSBPL5Q9H0X9 879 aaPredicted RBP13.42□□□□□ -0.26
LIN28A-201ENST00000254231 ZNF287Q9HBT7 754 aa13.42□□□□□ -0.26
LIN28A-201ENST00000254231 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 H7C1D1 291 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 PES1O00541 588 aaKnown RBP13.41□□□□□ -0.26
LIN28A-201ENST00000254231 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
LIN28A-201ENST00000254231 XBP1P17861 261 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 AFMP43652 599 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 FBXO18Q8NFZ0 1043 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 ZHX3Q9H4I2 956 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 NUP188Q5SRE5 1749 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 NR1I2O75469 434 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 ABCB5Q2M3G0 1257 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 LEO1Q8WVC0 666 aaPredicted RBP13.41□□□□□ -0.26
LIN28A-201ENST00000254231 TNMDQ9H2S6 317 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 WNT10BO00744 389 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
LIN28A-201ENST00000254231 UBE2SQ16763 222 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
LIN28A-201ENST00000254231 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
LIN28A-201ENST00000254231 CASP1P29466 404 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 TSGA10IPQ3SY00 556 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 SPC24Q8NBT2 197 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
LIN28A-201ENST00000254231 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 VWA3AA6NCI4 1184 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms