RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 NLRP12P59046 1061 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 FUT2Q10981 343 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 PKN1Q16512 942 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 LONRF3Q496Y0 759 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 OLFM4Q6UX06 510 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 TMC4Q7Z404 712 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 ZNF804AQ7Z570 1209 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 TBC1D16Q8TBP0 767 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 CRNKL1Q9BZJ0 848 aaKnown RBP21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 PODXL2Q9NZ53 605 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 ATP6V0A2Q9Y487 856 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 PDS5AQ29RF7 1337 aaKnown RBP21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 CUTAO60888 179 aa21.52■■□□□ 1.03
PDLIM4-201ENST00000253754 ZBTB7AO95365 584 aa21.52■■□□□ 1.03
PDLIM4-201ENST00000253754 CATIPQ7Z7H3 387 aa21.52■■□□□ 1.03
PDLIM4-201ENST00000253754 IQCA1Q86XH1 822 aa21.52■■□□□ 1.03
PDLIM4-201ENST00000253754 KRI1Q8N9T8 703 aaKnown RBP21.52■■□□□ 1.03
PDLIM4-201ENST00000253754 COL11A2P13942 1736 aaPredicted RBP21.51■■□□□ 1.03
PDLIM4-201ENST00000253754 TROAPQ12815 778 aa21.51■■□□□ 1.03
PDLIM4-201ENST00000253754 C2CD5Q86YS7 1000 aa21.51■■□□□ 1.03
PDLIM4-201ENST00000253754 TIGD1Q96MW7 591 aa21.51■■□□□ 1.03
PDLIM4-201ENST00000253754 RNF26Q9BY78 433 aaPredicted RBP21.51■■□□□ 1.03
PDLIM4-201ENST00000253754 KCNH3Q9ULD8 1083 aa21.51■■□□□ 1.03
PDLIM4-201ENST00000253754 FAM237AA0A1B0GTK4 181 aa21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 C15orf52Q6ZUT6 534 aaKnown RBP21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 METTL16Q86W50 562 aaKnown RBP21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 CABP5Q9NP86 173 aa21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 V9GY48 417 aaPredicted RBP21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 QSER1Q2KHR3 1735 aa21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 FOXN1O15353 648 aa21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 GRIK5Q16478 980 aa21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 EARS2Q5JPH6 523 aaKnown RBP21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 FILIP1Q7Z7B0 1213 aa21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 DZIP1Q86YF9 867 aaKnown RBP21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 FBXO2Q9UK22 296 aaPredicted RBP21.5■■□□□ 1.03
PDLIM4-201ENST00000253754 AKAP17AQ02040 695 aaKnown RBP21.49■■□□□ 1.03
PDLIM4-201ENST00000253754 H0YIN7 160 aa21.49■■□□□ 1.03
PDLIM4-201ENST00000253754 USP17L8P0C7I0 530 aa21.49■■□□□ 1.03
PDLIM4-201ENST00000253754 RILPL1Q5EBL4 403 aa21.49■■□□□ 1.03
PDLIM4-201ENST00000253754 BPIFA3Q9BQP9 254 aa21.49■■□□□ 1.03
PDLIM4-201ENST00000253754 CD209Q9NNX6 404 aa21.49■■□□□ 1.03
PDLIM4-201ENST00000253754 LRRC37AA6NMS7 1700 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 RBM10P98175 930 aaKnown RBP21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 NCAPHQ15003 741 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 FOXP4Q8IVH2 680 aaPredicted RBP21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 TUBE1Q9UJT0 475 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 DIXDC1Q155Q3 683 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 KRBA2Q6ZNG9 492 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 CNNM3Q8NE01 707 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 ATP8A2Q9NTI2 1148 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 MCM9Q9NXL9 1143 aa21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 ATF5Q9Y2D1 282 aaPredicted RBP21.48■■□□□ 1.03
PDLIM4-201ENST00000253754 ORC4O43929 436 aa21.47■■□□□ 1.03
PDLIM4-201ENST00000253754 CHRNA5P30532 468 aa21.47■■□□□ 1.03
PDLIM4-201ENST00000253754 NOM1Q5C9Z4 860 aaKnown RBP21.47■■□□□ 1.03
PDLIM4-201ENST00000253754 RIMBP2O15034 1052 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 PTPREP23469 700 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 TMTC3Q6ZXV5 915 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 LRRC8AQ8IWT6 810 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 PHF20Q9BVI0 1012 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 TMX4Q9H1E5 349 aaPredicted RBP21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 ARPP21Q9UBL0 812 aaPredicted RBP21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 WNT7AO00755 349 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 PRPF3O43395 683 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 PCP11498 1178 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 PPP2R5BQ15173 497 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 USP49Q70CQ1 688 aa21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 SRBD1Q8N5C6 995 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-201ENST00000253754 SMC2O95347 1197 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 SH3RF3Q8TEJ3 882 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 XPO4Q9C0E2 1151 aaKnown RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 RBM28Q9NW13 759 aaKnown RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 IFNKQ9P0W0 207 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 CCDC88AQ3V6T2 1871 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 LTBP1Q14766 1721 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 TSPY2A6NKD2 308 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 ZBTB22O15209 634 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 DDAH1O94760 285 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 LDHBP07195 334 aaKnown RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 LMOD1P29536 600 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 SPTY2D1Q68D10 685 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 DPP8Q6V1X1 898 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 TSC1Q92574 1164 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 DYNLL2Q96FJ2 89 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 HSD3B7Q9H2F3 369 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 PCDHA5Q9Y5H7 936 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 CNTNAP5Q8WYK1 1306 aa21.45■■□□□ 1.02
PDLIM4-201ENST00000253754 POLR2DO15514 142 aaKnown RBP21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 ATP1A3P13637 1013 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 IL1R1P14778 569 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 VEGFAP15692 232 aaPredicted RBP21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 KRT2P35908 639 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 GRAMD1CQ8IYS0 662 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 PRR29P0C7W0 189 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 SBK1Q52WX2 424 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 STYK1Q6J9G0 422 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 PDILTQ8N807 584 aa21.44■■□□□ 1.02
PDLIM4-201ENST00000253754 MYRIPQ8NFW9 859 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms