RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 USP27XA6NNY8 438 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 ZBTB22O15209 634 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 UFL1O94874 794 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 XBP1P17861 261 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 CASP1P29466 404 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 NCAPHQ15003 741 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 USP17L3A6NCW0 530 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 USP17L4A6NCW7 530 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 SKILP12757 684 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 KRT2P35908 639 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
LRFN1-201ENST00000248668 GPSM2P81274 684 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 PDE4BQ07343 736 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 USP17L1Q7RTZ2 530 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 DUOX1Q9NRD9 1551 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 NID2Q14112 1375 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 PTPREP23469 700 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 TPD52L1Q16890 204 aaPredicted RBP18.06■□□□□ 0.48
LRFN1-201ENST00000248668 TMTC3Q6ZXV5 915 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 EPSTI1Q96J88 318 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 ATP8A2Q9NTI2 1148 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 CDC25BP30305 580 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 RASGRP2Q7LDG7 609 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 MTERF4Q7Z6M4 381 aaKnown RBP18.06■□□□□ 0.48
LRFN1-201ENST00000248668 A0A1B0GUL6 1792 aa18.06■□□□□ 0.48
LRFN1-201ENST00000248668 GPKOWQ92917 476 aaPredicted RBP eCLIP18.05■□□□□ 0.48
LRFN1-201ENST00000248668 DHX58Q96C10 678 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 MKNK2Q9HBH9 465 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 TRIM75PA6NK02 468 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 BMP6P22004 513 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 AFMP43652 599 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 TIGD1Q96MW7 591 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 MTA3Q9BTC8 594 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
LRFN1-201ENST00000248668 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
LRFN1-201ENST00000248668 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
LRFN1-201ENST00000248668 STAMQ92783 540 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 DPF2Q92785 391 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 TUBE1Q9UJT0 475 aa18.05■□□□□ 0.48
LRFN1-201ENST00000248668 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
LRFN1-201ENST00000248668 NLRP5P59047 1200 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 PIK3AP1Q6ZUJ8 805 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 STAG2Q8N3U4 1231 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 STX8Q9UNK0 236 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 CNTNAP5Q8WYK1 1306 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 PLCD1P51178 756 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 TPM4P67936 248 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 FANCCQ00597 558 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 GOLGA8FQ08AF8 430 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 GOLGA8DPQ0D2H9 430 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 SPTY2D1Q68D10 685 aaPredicted RBP18.04■□□□□ 0.48
LRFN1-201ENST00000248668 MYRIPQ8NFW9 859 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 RASGRP4Q8TDF6 673 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 XDHP47989 1333 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 SERPINC1P01008 464 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 POSTNQ15063 836 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 OLFM4Q6UX06 510 aa18.04■□□□□ 0.48
LRFN1-201ENST00000248668 RBM28Q9NW13 759 aaKnown RBP18.04■□□□□ 0.48
LRFN1-201ENST00000248668 ORC4O43929 436 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 SERPINB2P05120 415 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 FGRP09769 529 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 RCSD1Q6JBY9 416 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 KAT14Q9H8E8 782 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 FANCLQ9NW38 375 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 MYH6P13533 1939 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 A0A087X0B3 334 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 SMTNL1A8MU46 457 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
LRFN1-201ENST00000248668 TRIM37O94972 964 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 TNNT1P13805 278 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 RCAN1P53805 252 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 ZNF804AQ7Z570 1209 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 WDR66Q8TBY9 1149 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 HSD3B7Q9H2F3 369 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 IL17RBQ9NRM6 502 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 IRS2Q9Y4H2 1338 aa18.03■□□□□ 0.48
LRFN1-201ENST00000248668 VWA3AA6NCI4 1184 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 DDAH1O94760 285 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 GYS1P13807 737 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 SRPRBQ9Y5M8 271 aaKnown RBP18.02■□□□□ 0.48
LRFN1-201ENST00000248668 C6orf229H3BNL8 230 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 GOLGA8HP0CJ92 632 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 CALM1P0DP23 149 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 CALM2P0DP24 149 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 CALM3P0DP25 149 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 UTP14CQ5TAP6 766 aaKnown RBP18.02■□□□□ 0.48
LRFN1-201ENST00000248668 MAN1B1Q9UKM7 699 aa18.02■□□□□ 0.48
LRFN1-201ENST00000248668 F8W031 263 aaPredicted RBP18.02■□□□□ 0.47
LRFN1-201ENST00000248668 MCM7P33993 719 aa18.02■□□□□ 0.47
LRFN1-201ENST00000248668 MYL5Q02045 173 aa18.02■□□□□ 0.47
LRFN1-201ENST00000248668 NPY5RQ15761 445 aa18.02■□□□□ 0.47
LRFN1-201ENST00000248668 C12orf60Q5U649 245 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms