RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 TMEM179Q6ZVK1 233 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 PRRT2Q7Z6L0 340 aaPredicted RBP13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 CCDC17Q96LX7 622 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 LAMA4Q16363 1823 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 RAD50Q92878 1312 aa13.19□□□□□ -0.3
TUBBP1-201ENST00000248151 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 PDHXO00330 501 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 NMT2O60551 498 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 BACE1P56817 501 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 FEZ1Q99689 392 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 ANO2Q9NQ90 1003 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 GREB1LQ9C091 1923 aaPredicted RBP13.18□□□□□ -0.3
TUBBP1-201ENST00000248151 RAD21O60216 631 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 CYP2C8P10632 490 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 CRHR2Q13324 411 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 IMMTQ16891 758 aaKnown RBP13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 OTUD7BQ6GQQ9 843 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 CTNNA3Q9UI47 895 aa13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
TUBBP1-201ENST00000248151 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 CYP21A2P08686 494 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 FGRP09769 529 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 ICA1Q05084 483 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 FASTKD5Q7L8L6 764 aaKnown RBP13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 SPICE1Q8N0Z3 855 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 NEDD1Q8NHV4 660 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 STAG1Q8WVM7 1258 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 ZKSCAN3Q9BRR0 538 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 IL17RBQ9NRM6 502 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 NEDD4P46934 1319 aa13.16□□□□□ -0.3
TUBBP1-201ENST00000248151 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 B4E1Z4 1266 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 CA12O43570 354 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 ORC4O43929 436 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 PEX10O60683 326 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
TUBBP1-201ENST00000248151 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 ZFYVE28Q9HCC9 887 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 ARHGEF10LQ9HCE6 1279 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 ZSWIM5Q9P217 1185 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
TUBBP1-201ENST00000248151 E7EWF7 191 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 GPR25O00155 361 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 KDM4AO75164 1064 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 STOX1Q6ZVD7 989 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 LRRC47Q8N1G4 583 aaKnown RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 SAGE1Q9NXZ1 904 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 SLC27A2O14975 620 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms