RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TRIM34Q9BYJ4 488 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 KRT23Q9C075 422 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 CNNM2Q9H8M5 875 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 CLEC11AQ9Y240 323 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 RASA1P20936 1047 aa19.75■□□□□ 0.75
CDKN1A-201ENST00000244741 MCM5P33992 734 aa19.75■□□□□ 0.75
CDKN1A-201ENST00000244741 EXOSC10Q01780 885 aaKnown RBP19.75■□□□□ 0.75
CDKN1A-201ENST00000244741 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
CDKN1A-201ENST00000244741 SENP2Q9HC62 589 aa19.75■□□□□ 0.75
CDKN1A-201ENST00000244741 ROBO3Q96MS0 1386 aa19.75■□□□□ 0.75
CDKN1A-201ENST00000244741 SIPA1L1O43166 1804 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 FGRP09769 529 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 PDCP20941 246 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 SHMT1P34896 483 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 TFAP4Q01664 338 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 ESR2Q92731 530 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 DCPSQ96C86 337 aaKnown RBP19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 PGAP2Q9UHJ9 254 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 ATRNL1Q5VV63 1379 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 TSPY2A6NKD2 308 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 HMGB1P09429 215 aaKnown RBP19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 FAM173BQ6P4H8 233 aa19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 APOBEC3FQ8IUX4 373 aaKnown RBP19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 ZNF444Q8N0Y2 327 aaPredicted RBP19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.74■□□□□ 0.75
CDKN1A-201ENST00000244741 ORC4O43929 436 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 LETM1O95202 739 aaPredicted RBP19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 PDIA4P13667 645 aaKnown RBP19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 MSNP26038 577 aaKnown RBP19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 BRF1Q92994 677 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.73■□□□□ 0.756e-6■■□□□ 12.3
CDKN1A-201ENST00000244741 NOL7Q9UMY1 257 aaKnown RBP19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 GDF11O95390 407 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 PRKG1Q13976 671 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 RRP1BQ14684 758 aaKnown RBP19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 KRT26Q7Z3Y9 468 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 RAB11FIP4Q86YS3 637 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 NAP1L2Q9ULW6 460 aaPredicted RBP19.73■□□□□ 0.75
CDKN1A-201ENST00000244741 WDR90Q96KV7 1748 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 MPHOSPH10O00566 681 aaKnown RBP19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 JAK2O60674 1132 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 TSPY3P0CV98 308 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 TSPY8P0CW00 308 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 AKR1B1P15121 316 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 CLEC10AQ8IUN9 316 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 SULF1Q8IWU6 871 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 CHMP4CQ96CF2 233 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 EHD4Q9H223 541 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 SCN4AP35499 1836 aa19.72■□□□□ 0.75
CDKN1A-201ENST00000244741 IFIT3O14879 490 aaKnown RBP19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 MAP1SQ66K74 1059 aaPredicted RBP19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 FOXP4Q8IVH2 680 aaPredicted RBP19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 GLIS2Q9BZE0 524 aaPredicted RBP19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 APOBRQ0VD83 1088 aa19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 TMEM67Q5HYA8 995 aa19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 UBAC1Q9BSL1 405 aa19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.71■□□□□ 0.75
CDKN1A-201ENST00000244741 KRT85P78386 507 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 JAG1P78504 1218 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 FMR1Q06787 632 aaKnown RBP eCLIP19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 PNMA8AQ86V59 439 aaPredicted RBP19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 FAM184AQ8NB25 1140 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 ZNF287Q9HBT7 754 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 PCP11498 1178 aaKnown RBP19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 CERKLQ49MI3 558 aaPredicted RBP19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 IGDCC4Q8TDY8 1250 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 IL17RBQ9NRM6 502 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 SWAP70Q9UH65 585 aa19.7■□□□□ 0.74
CDKN1A-201ENST00000244741 TNKSO95271 1327 aa19.69■□□□□ 0.74
CDKN1A-201ENST00000244741 UVSSAQ2YD98 709 aa19.69■□□□□ 0.74
CDKN1A-201ENST00000244741 ZSCAN10Q96SZ4 725 aaPredicted RBP19.69■□□□□ 0.74
CDKN1A-201ENST00000244741 COL2A1P02458 1487 aaPredicted RBP19.69■□□□□ 0.74
CDKN1A-201ENST00000244741 ENAHQ8N8S7 591 aaPredicted RBP19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 FUCA2Q9BTY2 467 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 CCDC39Q9UFE4 941 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 MYH8P13535 1937 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 PITPNM2Q9BZ72 1349 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 SH2B2O14492 632 aaPredicted RBP19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 IQCA1Q86XH1 822 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 MYL10Q9BUA6 226 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 LY9Q9HBG7 655 aa19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 TFIP11Q9UBB9 837 aaKnown RBP19.68■□□□□ 0.74
CDKN1A-201ENST00000244741 RXRAP19793 462 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 TATDN1Q6P1N9 297 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 NFXL1Q6ZNB6 911 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 ZC3H15Q8WU90 426 aaKnown RBP19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 HERC5Q9UII4 1024 aaKnown RBP19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 STX8Q9UNK0 236 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 ANGEL1Q9UNK9 670 aaKnown RBP19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 MTMR7Q9Y216 660 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 ZKSCAN5Q9Y2L8 839 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 ELP1O95163 1332 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 TRAF5O00463 557 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 SCRN1Q12765 414 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 WTAPQ15007 396 aa19.67■□□□□ 0.74
CDKN1A-201ENST00000244741 CEP95Q96GE4 821 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms