RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 USP17L4A6NCW7 530 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 PFKFB1P16118 471 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 XBP1P17861 261 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 RASA1P20936 1047 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 CLCN1P35523 988 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 USP17L1Q7RTZ2 530 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
HOXC11-201ENST00000243082 KAT14Q9H8E8 782 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 RGS17Q9UGC6 210 aaPredicted RBP21.32■■□□□ 1
HOXC11-201ENST00000243082 DDX60LQ5H9U9 1706 aaKnown RBP21.32■■□□□ 1
HOXC11-201ENST00000243082 ZNF202O95125 648 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 DOK7Q18PE1 504 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 RILPL1Q5EBL4 403 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 SHC4Q6S5L8 630 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 C16orf86Q6ZW13 317 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
HOXC11-201ENST00000243082 TSPY3P0CV98 308 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 TSPY8P0CW00 308 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 CCDC178Q5BJE1 867 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 SDF4Q9BRK5 362 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 ANO8Q9HCE9 1232 aaPredicted RBP21.31■■□□□ 1
HOXC11-201ENST00000243082 CCDC39Q9UFE4 941 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 NOL7Q9UMY1 257 aaKnown RBP21.31■■□□□ 1
HOXC11-201ENST00000243082 HPSEQ9Y251 543 aa21.31■■□□□ 1
HOXC11-201ENST00000243082 FAM237AA0A1B0GTK4 181 aa21.3■■□□□ 1
HOXC11-201ENST00000243082 CAVIN2O95810 425 aa21.3■■□□□ 1
HOXC11-201ENST00000243082 CDK8P49336 464 aa21.3■■□□□ 1
HOXC11-201ENST00000243082 ZNF165P49910 485 aa21.3■■□□□ 1
HOXC11-201ENST00000243082 C2CD5Q86YS7 1000 aa21.3■■□□□ 1
HOXC11-201ENST00000243082 PNMA1Q8ND90 353 aa21.3■■□□□ 1
HOXC11-201ENST00000243082 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.3■■□□□ 1
HOXC11-201ENST00000243082 CUTAO60888 179 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 ERCC4Q92889 916 aaPredicted RBP21.29■■□□□ 1
HOXC11-201ENST00000243082 FBXW7Q969H0 707 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 CLIC6Q96NY7 704 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 ZNF287Q9HBT7 754 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 KIF5BP33176 963 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 NPY5RQ15761 445 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 STX1AQ16623 288 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 RESP18Q5W5W9 173 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 MXD3Q9BW11 206 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 TMX4Q9H1E5 349 aaPredicted RBP21.29■■□□□ 1
HOXC11-201ENST00000243082 CABP5Q9NP86 173 aa21.29■■□□□ 1
HOXC11-201ENST00000243082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.28■■□□□ 1
HOXC11-201ENST00000243082 F8W031 263 aaPredicted RBP21.28■■□□□ 1
HOXC11-201ENST00000243082 KRT2P35908 639 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 SLC15A2Q16348 729 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 C11orf57Q6ZUT1 292 aaPredicted RBP21.28■■□□□ 1
HOXC11-201ENST00000243082 PCDHB6Q9Y5E3 794 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 SNED1Q8TER0 1413 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 PLCB2Q00722 1185 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 EZH2Q15910 746 aaKnown RBP21.28■■□□□ 1
HOXC11-201ENST00000243082 STYK1Q6J9G0 422 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 POTEAQ6S8J7 498 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 CAMKK2Q96RR4 588 aa21.28■■□□□ 1
HOXC11-201ENST00000243082 H0YIN7 160 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 GRM4Q14833 912 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 IQCB1Q15051 598 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 EARS2Q5JPH6 523 aaKnown RBP21.27■■□□□ 1
HOXC11-201ENST00000243082 STAG2Q8N3U4 1231 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 KRI1Q8N9T8 703 aaKnown RBP21.27■■□□□ 1
HOXC11-201ENST00000243082 TIGD1Q96MW7 591 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 EYA3Q99504 573 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 KIAA1468Q9P260 1216 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 TTF2Q9UNY4 1162 aaKnown RBP21.27■■□□□ 1
HOXC11-201ENST00000243082 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
HOXC11-201ENST00000243082 MYH1P12882 1939 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 FOCADQ5VW36 1801 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 A0A087WWV3 80 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 FAM205CA6NFA0 338 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 SCG2P13521 617 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 VEGFAP15692 232 aaPredicted RBP21.26■□□□□ 0.99
HOXC11-201ENST00000243082 SYKP43405 635 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 PFKFB3Q16875 520 aaPredicted RBP21.26■□□□□ 0.99
HOXC11-201ENST00000243082 TNFRSF25Q93038 417 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 MAD2L2Q9UI95 211 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 PTPREP23469 700 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 EN1Q05925 392 aaPredicted RBP21.26■□□□□ 0.99
HOXC11-201ENST00000243082 NEDD1Q8NHV4 660 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 ANO10Q9NW15 660 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 FBXO2Q9UK22 296 aaPredicted RBP21.26■□□□□ 0.99
HOXC11-201ENST00000243082 ZKSCAN5Q9Y2L8 839 aa21.26■□□□□ 0.99
HOXC11-201ENST00000243082 BAZ2BQ9UIF8 2168 aaKnown RBP21.25■□□□□ 0.99
HOXC11-201ENST00000243082 PTMAP06454 111 aaKnown RBP21.25■□□□□ 0.99
HOXC11-201ENST00000243082 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
HOXC11-201ENST00000243082 G3V3G9 751 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 PODNQ7Z5L7 613 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 DDX4Q9NQI0 724 aaKnown RBP21.24■□□□□ 0.99
HOXC11-201ENST00000243082 MSNP26038 577 aaKnown RBP21.24■□□□□ 0.99
HOXC11-201ENST00000243082 SCNN1DP51172 638 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 GRIN1Q05586 938 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 SLC35G1Q2M3R5 365 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 PIBF1Q8WXW3 757 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 DBNDD1Q9H9R9 158 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 KCNQ5Q9NR82 932 aa21.24■□□□□ 0.99
HOXC11-201ENST00000243082 ATP2B1P20020 1258 aa21.23■□□□□ 0.99
HOXC11-201ENST00000243082 CHRNA5P30532 468 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms